RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 MIIPQ5JXC2 388 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 IER5LQ5T953 404 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 GPRIN1Q7Z2K8 1008 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 SUGP1Q8IWZ8 645 aaKnown RBP19.06■□□□□ 0.64
HERC3-205ENST00000426683 FBXL6Q8N531 539 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 ARL14EPQ8N8R7 260 aaPredicted RBP19.06■□□□□ 0.64
HERC3-205ENST00000426683 PDZD8Q8NEN9 1154 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 BPIFB1Q8TDL5 484 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 SLC22A12Q96S37 553 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 PNPLA8Q9NP80 782 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 TDP1Q9NUW8 608 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 CCL26Q9Y258 94 aa19.06■□□□□ 0.64
HERC3-205ENST00000426683 RNF225M0QZC1 329 aaPredicted RBP19.05■□□□□ 0.64
HERC3-205ENST00000426683 PES1O00541 588 aaKnown RBP19.05■□□□□ 0.64
HERC3-205ENST00000426683 PAEPP09466 180 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 USP17L7P0C7H9 530 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 HDCP19113 662 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 PTMSP20962 102 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 PON1P27169 355 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 PDE6CP51160 858 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 MYL5Q02045 173 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 APBA1Q02410 837 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 FCHO2Q0JRZ9 810 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 ZNF268Q14587 947 aaPredicted RBP19.05■□□□□ 0.64
HERC3-205ENST00000426683 GOLGA7BQ2TAP0 167 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 SLC44A4Q53GD3 710 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 CDKAL1Q5VV42 579 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 GJB7Q6PEY0 223 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 ANKRD52Q8NB46 1076 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 RBBP8NLQ8NC74 664 aaPredicted RBP19.05■□□□□ 0.64
HERC3-205ENST00000426683 FLCNQ8NFG4 579 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 OVCA2Q8WZ82 227 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 DNASE1L2Q92874 299 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 IRF7Q92985 503 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 FBXO44Q9H4M3 255 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 KIF9Q9HAQ2 790 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 FANCLQ9NW38 375 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 TAB2Q9NYJ8 693 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 GMIPQ9P107 970 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 CHORDC1Q9UHD1 332 aaPredicted RBP19.05■□□□□ 0.64
HERC3-205ENST00000426683 TSPAN16Q9UKR8 245 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 KIAA1257Q9ULG3 409 aa19.05■□□□□ 0.64
HERC3-205ENST00000426683 FAM92AA1XBS5 289 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 CHADO15335 359 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 KRT5P13647 590 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 PFKLP17858 780 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 MFAP3P55082 362 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 MLF2Q15773 248 aaPredicted RBP19.04■□□□□ 0.64
HERC3-205ENST00000426683 ENOSF1Q7L5Y1 443 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 TTC30AQ86WT1 665 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 FAM81BQ96LP2 452 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 HESX1Q9UBX0 185 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 APEX2Q9UBZ4 518 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 GREB1Q4ZG55 1949 aa19.04■□□□□ 0.64
HERC3-205ENST00000426683 O00370 1275 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 STK25O00506 426 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 OAS1P00973 400 aaKnown RBP19.03■□□□□ 0.64
HERC3-205ENST00000426683 RFX1P22670 979 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 ZNF132P52740 706 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 SLC8A3P57103 927 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 ANO6Q4KMQ2 910 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 ARHGAP29Q52LW3 1261 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 CWF19L1Q69YN2 538 aaKnown RBP19.03■□□□□ 0.64
HERC3-205ENST00000426683 PIGZQ86VD9 579 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 TFAP2BQ92481 460 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 ZFYVE19Q96K21 471 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 NAT10Q9H0A0 1025 aaKnown RBP19.03■□□□□ 0.64
HERC3-205ENST00000426683 TBC1D17Q9HA65 648 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 SIX2Q9NPC8 291 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 HEBP1Q9NRV9 189 aa19.03■□□□□ 0.64
HERC3-205ENST00000426683 THG1LQ9NWX6 298 aaKnown RBP19.03■□□□□ 0.64
HERC3-205ENST00000426683 ARNTLO00327 626 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 OLFM2O95897 454 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 CALCAP01258 141 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 ZDHHC11BP0C7U3 371 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 BRD2P25440 801 aaKnown RBP19.02■□□□□ 0.64
HERC3-205ENST00000426683 KIF11P52732 1056 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 BCAT1P54687 386 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 VCPP55072 806 aaKnown RBP19.02■□□□□ 0.64
HERC3-205ENST00000426683 PRKCQQ04759 706 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 PDE4CQ08493 712 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 NCAPHQ15003 741 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 KRT31Q15323 416 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 ARHGAP44Q17R89 818 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 SNX30Q5VWJ9 437 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 TTC16Q8NEE8 873 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 RIN3Q8TB24 985 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 UBA3Q8TBC4 463 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 SHDQ96IW2 340 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 UBXN6Q9BZV1 441 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 RNF38Q9H0F5 515 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 VPS16Q9H269 839 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 TRPV5Q9NQA5 729 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 ARHGAP26Q9UNA1 814 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 CNTN6Q9UQ52 1028 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 SCML2Q9UQR0 700 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 OBSL1O75147 1896 aa19.02■□□□□ 0.64
HERC3-205ENST00000426683 NUP210Q8TEM1 1887 aaPredicted RBP19.02■□□□□ 0.64
HERC3-205ENST00000426683 CYP26A1O43174 497 aa19.01■□□□□ 0.63
HERC3-205ENST00000426683 LETM1O95202 739 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms