RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 IL1R2P27930 398 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 PIGFQ07326 219 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 GALNT1Q10472 559 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 BOP1Q14137 746 aaKnown RBP7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 ELF2Q15723 593 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 CCDC38Q502W7 563 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 PRR16Q569H4 304 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 CIR1Q86X95 450 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 YAF2Q8IY57 180 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 ZNF384Q8TF68 577 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 MARS2Q96GW9 593 aaKnown RBP7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 PHACTR3Q96KR7 559 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 XYLT2Q9H1B5 865 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 MAGED2Q9UNF1 606 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 ZNF536O15090 1300 aa7.45□□□□□ -1.22
HMGB1P32-201ENST00000425971 PXDNLA1KZ92 1463 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 DBX1A6NMT0 343 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 POLRMTO00411 1230 aaKnown RBP7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 SKAP2O75563 359 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 ACVR2AP27037 513 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 GABRB3P28472 473 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 NHLH2Q02577 135 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 RRAGBQ5VZM2 374 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 TAPT1Q6NXT6 567 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 MAMDC4Q6UXC1 1216 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 SPOCD1Q6ZMY3 1216 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 Q6ZSN1 163 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 CACNA2D3Q8IZS8 1091 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 SPATA5Q8NB90 893 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 MOGAT1Q96PD6 335 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 PNKPQ96T60 521 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 SMOQ99835 787 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 HEPHQ9BQS7 1158 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 REXO4Q9GZR2 422 aaKnown RBP7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 DHX36Q9H2U1 1008 aaKnown RBP7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 TFCP2L1Q9NZI6 479 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 CTTNBP2NLQ9P2B4 639 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 HSFX1Q9UBD0 423 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 CAPN11Q9UMQ6 739 aa7.44□□□□□ -1.22
HMGB1P32-201ENST00000425971 LOC102723971A0A1B0GUV8 181 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 CCDC78A2IDD5 438 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 FAM234BA2RU67 622 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 OTOL1A6NHN0 477 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 CAPN14A8MX76 684 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 PATE3B3GLJ2 98 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 KCNQ3O43525 872 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 TLR5O60602 858 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 RASSF9O75901 435 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 HSPA8P11142 646 aaKnown RBP7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 BMP7P18075 431 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 BTF3P20290 206 aaKnown RBP7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 ZACNQ401N2 412 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 Q6ZRM9 215 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 MYCT1Q8N699 235 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 OR56A1Q8NGH5 318 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 RAPGEF4Q8WZA2 1011 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 CCT6BQ92526 530 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 LRRC46Q96FV0 321 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 LRIG1Q96JA1 1093 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 SLC46A1Q96NT5 459 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 TRIB1Q96RU8 372 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 PPP1R9BQ96SB3 815 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 RMDN3Q96TC7 470 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 MNTQ99583 582 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 XPNPEP3Q9NQH7 507 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 TBC1D23Q9NUY8 699 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 HDAC9Q9UKV0 1011 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 TNRC6CQ9HCJ0 1690 aaKnown RBP7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 PKD1L3Q7Z443 1732 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 ABCC11Q96J66 1382 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 KIF1BO60333 1816 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 ANKARQ7Z5J8 1434 aa7.43□□□□□ -1.22
HMGB1P32-201ENST00000425971 PPLO60437 1756 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 CCDC195A0A1B0GUA6 201 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 GOLGA6L6A8MZA4 724 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 NPC1O15118 1278 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 CCP110O43303 1012 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 VPS4BO75351 444 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 INMTO95050 263 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 NDST3O95803 873 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 ATXN1LP0C7T5 689 aaKnown RBP7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 PAX3P23760 479 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 APOBEC3AP31941 199 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 COPAP53621 1224 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 HHEXQ03014 270 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 ZNF844Q08AG5 666 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 FCRL6Q6DN72 434 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 TAF2Q6P1X5 1199 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 LDHAL6AQ6ZMR3 332 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 LCNL1Q6ZST4 164 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 TMPRSS9Q7Z410 1059 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 LIMS2Q7Z4I7 341 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 CPXCR1Q8N123 301 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 ZNF808Q8N4W9 903 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 PSD4Q8NDX1 1056 aa7.42□□□□□ -1.22
HMGB1P32-201ENST00000425971 POC1BQ8TC44 478 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms