RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 DENND5BQ6ZUT9 1274 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MARK2Q7KZI7 788 aaKnown RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 NET1Q7Z628 596 aaPredicted RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MPP5Q8N3R9 675 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 UBR7Q8N806 425 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MCUR1Q96AQ8 359 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 CCDC77Q9BR77 488 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 S100A14Q9HCY8 104 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 SCAF8Q9UPN6 1271 aaKnown RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 CSH1P0DML2 217 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 CSH2P0DML3 217 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 PTK7Q13308 1070 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 TRNP1Q6NT89 227 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 TMEM270Q6UE05 265 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 FAM71DQ8N9W8 422 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 FEZF2Q8TBJ5 459 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 SLC44A1Q8WWI5 657 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MASTLQ96GX5 879 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 GLT8D2Q9H1C3 349 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 TMEM206Q9H813 350 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 TANC1Q9C0D5 1861 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 TM9SF1O15321 606 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MAP3K6O95382 1288 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 KRT1P04264 644 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 SIP14410 1827 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MMP8P22894 467 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 CALRP27797 417 aaKnown RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 L1CAMP32004 1257 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 MAN1A1P33908 653 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 SLC10A2Q12908 348 aaPredicted RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 FAM102BQ5T8I3 360 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 PGM2L1Q6PCE3 622 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 PHF13Q86YI8 300 aaPredicted RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 OR6Y1Q8NGX8 325 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 CLEC4DQ8WXI8 215 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 APOPT1Q96IL0 206 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 PRICKLE1Q96MT3 831 aaPredicted RBP13.47□□□□□ -0.25
TOP2B-203ENST00000424225 VCXQ9H320 206 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 SHOC2Q9UQ13 582 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 PCDHB2Q9Y5E7 798 aa13.47□□□□□ -0.25
TOP2B-203ENST00000424225 F8W8V4 182 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 H0YIN7 160 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 TMX2-CTNND1H3BSU7 103 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 NSFP46459 744 aaKnown RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 GSTA3Q16772 222 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 PPP6R3Q5H9R7 873 aaPredicted RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 HPS6Q86YV9 775 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 PYROXD1Q8WU10 500 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 PEBP4Q96S96 227 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 AGO4Q9HCK5 861 aaKnown RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 ACSS2Q9NR19 701 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 SIRPGQ9P1W8 387 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 PDP2Q9P2J9 529 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 MTO1Q9Y2Z2 717 aaKnown RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 HLA-DRAP01903 254 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 VAV1P15498 845 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 VCLP18206 1134 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 MSX2P35548 267 aaPredicted RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 SNAPC2Q13487 334 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 ABCB5Q2M3G0 1257 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 BBS9Q3SYG4 887 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 TMCO4Q5TGY1 634 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 TMC7Q7Z402 723 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 PHTF2Q8N3S3 785 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 SENP6Q9GZR1 1112 aaPredicted RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 FAM192AQ9GZU8 254 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.25
TOP2B-203ENST00000424225 PCDH9Q9HC56 1237 aa13.46□□□□□ -0.25
TOP2B-203ENST00000424225 FUT4P22083 530 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 RFC1P35251 1148 aaPredicted RBP13.46□□□□□ -0.26
TOP2B-203ENST00000424225 GRIA1P42261 906 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 BTKQ06187 659 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 SMAD1Q15797 465 aaKnown RBP13.46□□□□□ -0.26
TOP2B-203ENST00000424225 RASIP1Q5U651 963 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 POLNQ7Z5Q5 900 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 CAND1Q86VP6 1230 aaKnown RBP13.46□□□□□ -0.26
TOP2B-203ENST00000424225 SPATA24Q86W54 205 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 OPTNQ96CV9 577 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 C17orf75Q9HAS0 396 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF510Q9Y2H8 683 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 PLLPQ9Y342 182 aa13.46□□□□□ -0.26
TOP2B-203ENST00000424225 RGL2O15211 777 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF132P52740 706 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 MYBPC1Q00872 1141 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ZACNQ401N2 412 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 FAXCQ5TGI0 409 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 FYB2Q5VWT5 728 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 CENPUQ71F23 418 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 CFAP61Q8NHU2 1237 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ZFP28Q8NHY6 868 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ZNF526Q8TF50 670 aaPredicted RBP13.45□□□□□ -0.26
TOP2B-203ENST00000424225 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
TOP2B-203ENST00000424225 GBP5Q96PP8 586 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms