RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 MSANTD3Q96H12 275 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 ARID3AQ99856 593 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 RNF38Q9H0F5 515 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 IL37Q9NZH6 218 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 ARHGAP26Q9UNA1 814 aa16.43■□□□□ 0.22
SPC24-201ENST00000423327 OTOGLQ3ZCN5 2332 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 CFAP54Q96N23 3096 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 NCAM2O15394 837 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 LAMTOR5O43504 91 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 CILPO75339 1184 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 AP1G2O75843 785 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 PGFP49763 221 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 IFRD2Q12894 506 aaPredicted RBP16.42■□□□□ 0.22
SPC24-201ENST00000423327 RUNX3Q13761 415 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 ITPRIPL2Q3MIP1 535 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 TSSK4Q6SA08 328 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 GPRIN1Q7Z2K8 1008 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 SH3RF2Q8TEC5 729 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 NELL1Q92832 810 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 SMARCD1Q96GM5 515 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 DUSP9Q99956 384 aaKnown RBP16.42■□□□□ 0.22
SPC24-201ENST00000423327 MED10Q9BTT4 135 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 CSNK1G1Q9HCP0 422 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 DMAP1Q9NPF5 467 aaPredicted RBP16.42■□□□□ 0.22
SPC24-201ENST00000423327 C2orf42Q9NWW7 574 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 THG1LQ9NWX6 298 aaKnown RBP16.42■□□□□ 0.22
SPC24-201ENST00000423327 TRPM5Q9NZQ8 1165 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 FBXO4Q9UKT5 387 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
SPC24-201ENST00000423327 PTPRZ1P23471 2315 aaPredicted RBP16.42■□□□□ 0.22
SPC24-201ENST00000423327 KIAA1549LQ6ZVL6 1849 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 FAM92AA1XBS5 289 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 PPP1R3GB7ZBB8 358 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 HHLA1C9JL84 531 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
SPC24-201ENST00000423327 HDCP19113 662 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 CD58P19256 250 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 HOXC13P31276 330 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 FKBP3Q00688 224 aaKnown RBP16.41■□□□□ 0.22
SPC24-201ENST00000423327 CSTF1Q05048 431 aaKnown RBP16.41■□□□□ 0.22
SPC24-201ENST00000423327 LRRC63Q05C16 580 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 CCINQ13939 588 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 MORC3Q14149 939 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 EML3Q32P44 896 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 DCAF17Q5H9S7 520 aaPredicted RBP16.41■□□□□ 0.22
SPC24-201ENST00000423327 TTI2Q6NXR4 508 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 FBXL13Q8NEE6 735 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 OSCP1Q8WVF1 389 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 TATDN2Q93075 761 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 NKD2Q969F2 451 aaPredicted RBP16.41■□□□□ 0.22
SPC24-201ENST00000423327 SLC35C1Q96A29 364 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 TSG101Q99816 390 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 IMPG2Q9BZV3 1241 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 CYP3A43Q9HB55 503 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 ATP8B3O60423 1300 aa16.41■□□□□ 0.22
SPC24-201ENST00000423327 EP300Q09472 2414 aaPredicted RBP16.4■□□□□ 0.22
SPC24-201ENST00000423327 LEFTY2O00292 366 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 BIN1O00499 593 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 ZDHHC11BP0C7U3 371 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 PFKLP17858 780 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 YWHAQP27348 245 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 ADORA2BP29275 332 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 SLC7A9P82251 487 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 ZNF528Q3MIS6 628 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 PKN3Q6P5Z2 889 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 CLEC20AQ6ZU45 233 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 TTC16Q8NEE8 873 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 FBXO32Q969P5 355 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
SPC24-201ENST00000423327 HNRNPABQ99729 332 aaKnown RBP16.4■□□□□ 0.22
SPC24-201ENST00000423327 LINC00597Q9H2U6 94 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 FBRSL1Q9HCM7 1045 aaKnown RBP16.4■□□□□ 0.22
SPC24-201ENST00000423327 RAB20Q9NX57 234 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 GMIPQ9P107 970 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 COQ4Q9Y3A0 265 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 CPQQ9Y646 472 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 ATG2BQ96BY7 2078 aa16.4■□□□□ 0.22
SPC24-201ENST00000423327 PSMA7O14818 248 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 RTN3O95197 1032 aaPredicted RBP16.39■□□□□ 0.21
SPC24-201ENST00000423327 PPP3CCP48454 512 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 MAP3K7CLP57077 242 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 SATB1Q01826 763 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 PDGFRLQ15198 375 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 GAB4Q2WGN9 574 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 TMEM196Q5HYL7 178 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 FSTL4Q6MZW2 842 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 C1orf228Q6PIY5 440 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 OVCA2Q8WZ82 227 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 DHTKD1Q96HY7 919 aaPredicted RBP16.39■□□□□ 0.21
SPC24-201ENST00000423327 SLITRK1Q96PX8 696 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 NT5C1AQ9BXI3 368 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 ECT2Q9H8V3 914 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 DUS2Q9NX74 493 aaKnown RBP16.39■□□□□ 0.21
SPC24-201ENST00000423327 SMPD4Q9NXE4 827 aa16.39■□□□□ 0.21
SPC24-201ENST00000423327 EHD2Q9NZN4 543 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms