RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 KCNK16Q96T55 309 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 RNF38Q9H0F5 515 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 IL37Q9NZH6 218 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ARHGAP26Q9UNA1 814 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 ATP6V1DQ9Y5K8 247 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 WNT6Q9Y6F9 365 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 RALGAPA1Q6GYQ0 2036 aa11.75□□□□□ -0.53
SSBP3-206ENST00000420121 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-206ENST00000420121 HLA-DRAP01903 254 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 TRIM49P0CI25 452 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 TRIM49CP0CI26 452 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 HDCP19113 662 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 ANXA13P27216 316 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 GJA4P35212 333 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 CXCL12P48061 93 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 VAMP7P51809 220 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 SLC7A9P82251 487 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 TAF10Q12962 218 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 PDGFRLQ15198 375 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 SGSM1Q2NKQ1 1148 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 GAB4Q2WGN9 574 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 SMYD4Q8IYR2 804 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-206ENST00000420121 SYNPOQ8N3V7 929 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 TWNKQ96RR1 684 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 LINC00597Q9H2U6 94 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 ECT2Q9H8V3 914 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 APOBEC3GQ9HC16 384 aaKnown RBP11.74□□□□□ -0.53
SSBP3-206ENST00000420121 TRPM5Q9NZQ8 1165 aa11.74□□□□□ -0.53
SSBP3-206ENST00000420121 SMG5Q9UPR3 1016 aaKnown RBP11.74□□□□□ -0.53
SSBP3-206ENST00000420121 FAM92AA1XBS5 289 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 BEST1O76090 585 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 EGFP01133 1207 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 CCDC130P13994 396 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 PFKLP17858 780 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 TGM1P22735 817 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 GCLMP48507 274 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 GALK1P51570 392 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 NDST1P52848 882 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 ENPEPQ07075 957 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 INCA1Q0VD86 236 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 ORC1Q13415 861 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 PNOCQ13519 176 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 ACOT1Q86TX2 421 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 NUP93Q8N1F7 819 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 CRYBG2Q8N1P7 616 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 SCAMP5Q8TAC9 235 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 TAS1R2Q8TE23 839 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 WHAMMQ8TF30 809 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 TAF4BQ92750 862 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
SSBP3-206ENST00000420121 SMOQ99835 787 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 CSNK1G1Q9HCP0 422 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 DUS2Q9NX74 493 aaKnown RBP11.73□□□□□ -0.53
SSBP3-206ENST00000420121 FRMD4BQ9Y2L6 1034 aa11.73□□□□□ -0.53
SSBP3-206ENST00000420121 ANTXRLA6NF34 631 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 CHURC1-FNTBB4DL54 471 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 LEFTY2O00292 366 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 HRO43593 1189 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 KIF20AO95235 890 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 ZDHHC11BP0C7U3 371 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 HOXA6P31267 233 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 OPRD1P41143 372 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 PIK3CAP42336 1068 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 PPP3CCP48454 512 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 FNTBP49356 437 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 PGFP49763 221 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 SLC5A3P53794 718 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 NRLP54845 237 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 SRSF5Q13243 272 aaKnown RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 ADAM9Q13443 819 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 EDRF1Q3B7T1 1238 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 SNX30Q5VWJ9 437 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 CC2D1AQ6P1N0 951 aaPredicted RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 INTS8Q75QN2 995 aaKnown RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 ZC3H3Q8IXZ2 948 aaKnown RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 FAM186BQ8IYM0 893 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 KIAA2013Q8IYS2 634 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 SMARCD1Q96GM5 515 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 TNIP3Q96KP6 325 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.531e-10■■■■■ 112.8
SSBP3-206ENST00000420121 KRT82Q9NSB4 513 aa11.72□□□□□ -0.53
SSBP3-206ENST00000420121 POLR3BQ9NW08 1133 aaPredicted RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 MYO18AQ92614 2054 aaKnown RBP11.72□□□□□ -0.53
SSBP3-206ENST00000420121 HHLA1C9JL84 531 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 RNF40O75150 1001 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 RTN3O95197 1032 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-206ENST00000420121 CYP17A1P05093 508 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-206ENST00000420121 YWHAQP27348 245 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 PSMC2P35998 433 aaKnown RBP11.71□□□□□ -0.53
SSBP3-206ENST00000420121 PRCPP42785 496 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 IFNAR2P48551 515 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 PMS1P54277 932 aaKnown RBP11.71□□□□□ -0.53
SSBP3-206ENST00000420121 IFRD2Q12894 506 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-206ENST00000420121 PPP2R5DQ14738 602 aa11.71□□□□□ -0.53
SSBP3-206ENST00000420121 COBLL1Q53SF7 1204 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms