RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ZDHHC11BP0C7U3 371 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 UCHL3P15374 230 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 BCAT1P54687 386 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 STILQ15468 1287 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 GOLGA7BQ2TAP0 167 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 RAB41Q5JT25 222 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 SNX30Q5VWJ9 437 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 LUZP1Q86V48 1076 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 SCAMP5Q8TAC9 235 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 ZSCAN18Q8TBC5 510 aaPredicted RBP19.72■□□□□ 0.75
PTCD3-204ENST00000418628 RSAD2Q8WXG1 361 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 ELSPBP1Q96BH3 223 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 GCNAQ96QF7 691 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 RPP25Q9BUL9 199 aaKnown RBP19.72■□□□□ 0.75
PTCD3-204ENST00000418628 LSM14BQ9BX40 385 aaKnown RBP19.72■□□□□ 0.75
PTCD3-204ENST00000418628 UBXN6Q9BZV1 441 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 DNAJC12Q9UKB3 198 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 DUSP12Q9UNI6 340 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 DAAM1Q9Y4D1 1078 aa19.72■□□□□ 0.75
PTCD3-204ENST00000418628 DLL1O00548 723 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 OLFM2O95897 454 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 TPM2P07951 284 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 CD19P15391 556 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 PFKLP17858 780 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 BRD2P25440 801 aaKnown RBP19.71■□□□□ 0.75
PTCD3-204ENST00000418628 PPP3CCP48454 512 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 KLK7P49862 253 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 KIF11P52732 1056 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 BST2Q10589 180 aaKnown RBP19.71■□□□□ 0.75
PTCD3-204ENST00000418628 CNGA2Q16280 664 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 ARHGAP15Q53QZ3 475 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 GPR158Q5T848 1215 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 MON1AQ86VX9 555 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 RSPRY1Q96DX4 576 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 SLC46A2Q9BY10 475 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 USP3Q9Y6I4 520 aa19.71■□□□□ 0.75
PTCD3-204ENST00000418628 A0A1B0GTH6 734 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 ZNF840PA6NDX5 716 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 PES1O00541 588 aaKnown RBP19.7■□□□□ 0.74
PTCD3-204ENST00000418628 XPO1O14980 1071 aaKnown RBP19.7■□□□□ 0.74
PTCD3-204ENST00000418628 EPHB6O15197 1021 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 PRAMEF12O95522 483 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 OAS1P00973 400 aaKnown RBP19.7■□□□□ 0.74
PTCD3-204ENST00000418628 CALCAP01258 141 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 CDK11BP21127 795 aaKnown RBP19.7■□□□□ 0.74
PTCD3-204ENST00000418628 YWHAQP27348 245 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 PLA2G4AP47712 749 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 ZXDAP98168 799 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 TAF10Q12962 218 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 TDGQ13569 410 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 ARHGAP44Q17R89 818 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 FKBP15Q5T1M5 1219 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 TXNDC8Q6A555 127 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 TANGO2Q6ICL3 276 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 LRSAM1Q6UWE0 723 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 FAM71AQ8IYT1 594 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 CMTM8Q8IZV2 173 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 SLC44A3Q8N4M1 653 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 MRPS31Q92665 395 aaKnown RBP19.7■□□□□ 0.74
PTCD3-204ENST00000418628 KXD1Q9BQD3 176 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 SMOC2Q9H3U7 446 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 RTN4Q9NQC3 1192 aaKnown RBP19.7■□□□□ 0.74
PTCD3-204ENST00000418628 OBP2AQ9NY56 170 aa19.7■□□□□ 0.74
PTCD3-204ENST00000418628 TULP2O00295 520 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 SETSIPP0DME0 302 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 KRT5P13647 590 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 ALADP13716 330 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 RPL34P49207 117 aaKnown RBP19.69■□□□□ 0.74
PTCD3-204ENST00000418628 JAM2P57087 298 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 PDE4CQ08493 712 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 ZNF268Q14587 947 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-204ENST00000418628 SYCP1Q15431 976 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 VITQ6UXI7 678 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 CCDC186Q7Z3E2 898 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 PIGZQ86VD9 579 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 ARID3BQ8IVW6 561 aaPredicted RBP19.69■□□□□ 0.74
PTCD3-204ENST00000418628 UBALD2Q8IYN6 164 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 PDZD8Q8NEN9 1154 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 EDAQ92838 391 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 SLITRK1Q96PX8 696 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 PLA2G2FQ9BZM2 168 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 FBXO44Q9H4M3 255 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 ACP6Q9NPH0 428 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 SCML2Q9UQR0 700 aa19.69■□□□□ 0.74
PTCD3-204ENST00000418628 C2orf78A6NCI8 922 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 F8VZ95 297 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 FOXN3O00409 490 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-204ENST00000418628 TEX33O43247 280 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 PNMA6AP0CW24 399 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-204ENST00000418628 GNA15P30679 374 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 CLCN1P35523 988 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 TUBP50607 506 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 ZNF445P59923 1031 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 UBXN1Q04323 297 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 DRAP1Q14919 205 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-204ENST00000418628 MAB21L3Q8N8X9 362 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 ST13P5Q8NFI4 369 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-204ENST00000418628 SLC35F5Q8WV83 523 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 KCTD13Q8WZ19 329 aa19.68■□□□□ 0.74
PTCD3-204ENST00000418628 FBXO32Q969P5 355 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms