RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 RCAN3Q9UKA8 241 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 ZNF215Q9UL58 517 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 TRPV2Q9Y5S1 764 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 ITPR3Q14573 2671 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 MUC22E2RYF6 1773 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 KIF26AQ9ULI4 1882 aaPredicted RBP6.02□□□□□ -1.44
ECHDC1-206ENST00000417628 DOCK8Q8NF50 2099 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 CYP2D7A0A087X1C5 515 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 GSG1L2A8MUP6 293 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 PATE3B3GLJ2 98 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 NT5C1B-RDH14C9J2C7 533 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 H0Y8X5 98 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 KIF2AO00139 706 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 MEIS1O00470 390 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 GGPS1O95749 300 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 GLUD1P00367 558 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 SCG5P05408 212 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 CNPP09543 421 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 CT47B1P0C2W7 299 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 CHMLP26374 656 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 HOXC12P31275 282 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 EIF2S3P41091 472 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 KIR3DL1P43629 444 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 PXNP49023 591 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 BCAR1P56945 870 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 CXADRP78310 365 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 IRX4P78413 519 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 TNK2Q07912 1038 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 MAP4K2Q12851 820 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 KARSQ15046 597 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 ZRSR1Q15695 479 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 DENND5AQ6IQ26 1287 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 Q6ZS52 159 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 SDCCAG8Q86SQ7 713 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 HDDC3Q8N4P3 179 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 PNPLA1Q8N8W4 532 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 TMEM145Q8NBT3 493 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 TCP11Q8WWU5 503 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 CLEC4DQ8WXI8 215 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 MIEF2Q96C03 454 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF396Q96N95 335 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 ADAM2Q99965 735 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 ELAC1Q9H777 363 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 TRIM39Q9HCM9 518 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 SPATS2LQ9NUQ6 558 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 C2orf42Q9NWW7 574 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 ZDHHC7Q9NXF8 308 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 EVLQ9UI08 416 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 TUBE1Q9UJT0 475 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 KCNH3Q9ULD8 1083 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 APOBEC2Q9Y235 224 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 GPR55Q9Y2T6 319 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 RRP15Q9Y3B9 282 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 CAPN6Q9Y6Q1 641 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 U3KQE9 123 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 ACACAQ13085 2346 aa6.02□□□□□ -1.45
ECHDC1-206ENST00000417628 IGKV6D-41A0A0C4DH26 115 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 TRABD2BA6NFA1 517 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 RNF225M0QZC1 329 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 PDLIM1O00151 329 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 MEFVO15553 781 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 ECI2O75521 394 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 DNAJC8O75937 253 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 CDKL5O76039 1030 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 TTLL1O95922 423 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 SNRPB2P08579 225 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 UBTFL1P0CB47 393 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 SKILP12757 684 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 HOXC13P31276 330 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 TRPC1P48995 793 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 RPS6KA3P51812 740 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 AMPD2Q01433 879 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 NEDD9Q14511 834 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 TRIP6Q15654 476 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 PRSS53Q2L4Q9 553 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 TMEM266Q2M3C6 531 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 DPY19L1Q2PZI1 675 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 SLC35F1Q5T1Q4 408 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 SYT10Q6XYQ8 523 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 TMEM173Q86WV6 379 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 ERC1Q8IUD2 1116 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 LCORLQ8N3X6 602 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 GSTCDQ8NEC7 633 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 NSUN6Q8TEA1 469 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 CHAC2Q8WUX2 184 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 C17orf50Q8WW18 174 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 KCTD13Q8WZ19 329 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 FGF13Q92913 245 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 MED8Q96G25 268 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 CCDC140Q96MF4 163 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 IWS1Q96ST2 819 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 DSCC1Q9BVC3 393 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 TARS2Q9BW92 718 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 NUSAP1Q9BXS6 441 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 HDAC8Q9BY41 377 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 MRPL9Q9BYD2 267 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 NT5C3AQ9H0P0 336 aa6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 FAM49AQ9H0Q0 323 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-206ENST00000417628 ZNF768Q9H5H4 540 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms