RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PTK2Q05397 1052 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 TDGQ13569 410 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 HTR4Q13639 388 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 DRAP1Q14919 205 aaPredicted RBP24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 FAM78AQ5JUQ0 283 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 PARM1Q6UWI2 310 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 MON1AQ86VX9 555 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 NEK11Q8NG66 645 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 SCAMP5Q8TAC9 235 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 ASB16Q96NS5 453 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 TRPV4Q9HBA0 871 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 RTN4Q9NQC3 1192 aaKnown RBP24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 FAM207AQ9NSI2 230 aaPredicted RBP24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 MUTYHQ9UIF7 546 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 SIK3Q9Y2K2 1263 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 FHOD1Q9Y613 1164 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 NUMBLQ9Y6R0 609 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 NOTCH4Q99466 2003 aa24.39■■□□□ 1.49
SMARCB1-205ENST00000417137 HHLA1C9JL84 531 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 NRG2O14511 850 aaPredicted RBP24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 DCXO43602 365 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 ECI2O75521 394 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 SETSIPP0DME0 302 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 PFKLP17858 780 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 GNA15P30679 374 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 PDE6CP51160 858 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 TTC30AQ86WT1 665 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 ELSPBP1Q96BH3 223 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 NAA15Q9BXJ9 866 aaKnown RBP24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 SLC46A2Q9BY10 475 aa24.38■■□□□ 1.49
SMARCB1-205ENST00000417137 DOCK6Q96HP0 2047 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 DPYSL4O14531 572 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 XPO1O14980 1071 aaKnown RBP24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 AVPR1AP37288 418 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 ZNF445P59923 1031 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 PDE4CQ08493 712 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 STXBP5Q5T5C0 1151 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 TXNDC8Q6A555 127 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 ARID3BQ8IVW6 561 aaPredicted RBP24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 UBALD2Q8IYN6 164 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 FAM71AQ8IYT1 594 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 SLC44A3Q8N4M1 653 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 MAB21L3Q8N8X9 362 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 UBA3Q8TBC4 463 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 ZNF606Q8WXB4 792 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 RSAD2Q8WXG1 361 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 FGF14Q92915 247 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 GANQ9H2C0 597 aa24.37■■□□□ 1.49
SMARCB1-205ENST00000417137 NCANO14594 1321 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 PTPRDP23468 1912 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 FAM92AA1XBS5 289 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 ZNF840PA6NDX5 716 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 M0QYV0 167 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 CYP26A1O43174 497 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 THAP12O43422 761 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 ABL1P00519 1130 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 KLK7P49862 253 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 KIF11P52732 1056 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 POLR2FP61218 127 aaKnown RBP24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 MEA1Q16626 185 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 POTEHQ6S545 545 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 PIGZQ86VD9 579 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 CMTM8Q8IZV2 173 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 TRPC7Q9HCX4 862 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 CHORDC1Q9UHD1 332 aaPredicted RBP24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 AJAP1Q9UKB5 411 aaPredicted RBP24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 SCML2Q9UQR0 700 aa24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 ARIH1Q9Y4X5 557 aaPredicted RBP24.36■■□□□ 1.49
SMARCB1-205ENST00000417137 TRAV19A0A0A6YYK7 116 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 A0A1B0GTH6 734 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 PI4K2BG5E9Z4 385 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 TADA3O75528 432 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 FANCCQ00597 558 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 PKDCCQ504Y2 493 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 TANGO2Q6ICL3 276 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 SPAG5Q96R06 1193 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 KXD1Q9BQD3 176 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 ZSWIM1Q9BR11 485 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 LRRC4Q9HBW1 653 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 TLR8Q9NR97 1041 aaKnown RBP24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 OBP2AQ9NY56 170 aa24.35■■□□□ 1.49
SMARCB1-205ENST00000417137 TEX33O43247 280 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 CALCAP01258 141 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 USP17L7P0C7H9 530 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 HDCP19113 662 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 PLA2G4AP47712 749 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 UBASH3AP57075 661 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 SNX30Q5VWJ9 437 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 GPRIN1Q7Z2K8 1008 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 KCTD13Q8WZ19 329 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 NAP1L5Q96NT1 182 aaPredicted RBP24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 USP3Q9Y6I4 520 aa24.34■■□□□ 1.49
SMARCB1-205ENST00000417137 A0A1W2PQC6 194 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 F8VZ95 297 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 CLCN1P35523 988 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 KRT9P35527 623 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 VIPR2P41587 438 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 PSEN1P49768 467 aa24.33■■□□□ 1.49
SMARCB1-205ENST00000417137 ZXDAP98168 799 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 616.1 ms