RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 GRAMD4Q6IC98 578 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 PASD1Q8IV76 773 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 FBXO36Q8NEA4 188 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 EBF4Q9BQW3 602 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 SLC13A1Q9BZW2 595 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 WWP1Q9H0M0 922 aa15.33■□□□□ 0.05
NCKIPSD-204ENST00000416649 TRIM43BA6NCK2 446 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 TMEM221A6NGB7 291 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 STRNO43815 780 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 TRMUO75648 421 aaKnown RBP15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 TGDSO95455 350 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 MFAP3P55082 362 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 PEX6Q13608 980 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 CNGA3Q16281 694 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 ATP11CQ8NB49 1132 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 RAB3IL1Q8TBN0 382 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 PCDH18Q9HCL0 1135 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 FBXO28Q9NVF7 368 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 DMAC2Q9NW81 257 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 ZDHHC7Q9NXF8 308 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 ZNRF3Q9ULT6 936 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 DOLKQ9UPQ8 538 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 PROCP04070 461 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 DYNLT1P63172 113 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 DENND5BQ6ZUT9 1274 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 TMEM179Q6ZVK1 233 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 RHOT1Q8IXI2 618 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 UBAP1Q9NZ09 502 aa15.33■□□□□ 0.04
NCKIPSD-204ENST00000416649 ATRNL1Q5VV63 1379 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 LOC100653049A0A140TA62 436 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 WNT10BO00744 389 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 MSH4O15457 936 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 LIASO43766 372 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 KRT34O76011 436 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 SLC5A2P31639 672 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 FDFT1P37268 417 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 FAAP100Q0VG06 881 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 PRKG1Q13976 671 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 KRT81Q14533 505 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 CHI3L2Q15782 390 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 HSF5Q4G112 596 aaPredicted RBP15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 FNBP1LQ5T0N5 605 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 GPATCH4Q5T3I0 446 aaKnown RBP15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 PPP1R18Q6NYC8 613 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 ADGRD1Q6QNK2 874 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 ZCCHC23Q6ZST2 131 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 CTAGE3PQ8IX95 158 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 C11orf70Q9BRQ4 267 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 ARHGAP10A1A4S6 786 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 CYB561D2O14569 222 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 COPEO14579 308 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 INHBAP08476 426 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 STIP1P31948 543 aaKnown RBP15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 CCNIQ14094 377 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 LPIN1Q14693 890 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 MORF4L2Q15014 288 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 ANKRD22Q5VYY1 191 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 AAGABQ6PD74 315 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 SEMA4DQ92854 862 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 ALKBH8Q96BT7 664 aaKnown RBP15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 MAF1Q9H063 256 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 TIMMDC1Q9NPL8 285 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 KCNK4Q9NYG8 393 aa15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
NCKIPSD-204ENST00000416649 TMEM150BA6NC51 233 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 PSMD7P51665 324 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 NFX1Q12986 1120 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 CYTH1Q15438 398 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 TATDN1Q6P1N9 297 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 CDHR3Q6ZTQ4 885 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 ANO5Q75V66 913 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 HPS6Q86YV9 775 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 DMTF1Q9Y222 760 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 ZMPSTE24O75844 475 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 SLITRK3O94933 977 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 TFPTP0C1Z6 253 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 SRGAP2CP0DJJ0 459 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 SRGAP2BP0DMP2 458 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 NOVP48745 357 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 NAA20P61599 178 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 C16orf72Q14CZ0 275 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 KLHL38Q2WGJ6 581 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 RNASEH2BQ5TBB1 312 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 C1orf186Q6ZWK4 172 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 DIS3LQ8TF46 1054 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 DCAKDQ8WVC6 231 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 APOPT1Q96IL0 206 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 PI4K2AQ9BTU6 479 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 APOL6Q9BWW8 343 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 EPB41L1Q9H4G0 881 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 SSU72Q9NP77 194 aaKnown RBP15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 INIPQ9NRY2 104 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 STRIP2Q9ULQ0 834 aa15.31■□□□□ 0.04
NCKIPSD-204ENST00000416649 FAM155BO75949 473 aa15.3■□□□□ 0.04
NCKIPSD-204ENST00000416649 DLK2Q6UY11 383 aa15.3■□□□□ 0.04
NCKIPSD-204ENST00000416649 MCOLN2Q8IZK6 566 aa15.3■□□□□ 0.04
NCKIPSD-204ENST00000416649 GALNT4Q8N4A0 578 aa15.3■□□□□ 0.04
NCKIPSD-204ENST00000416649 NLGN2Q8NFZ4 835 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms