RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 SCAMP3O14828 347 aaKnown RBP16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 KLF8O95600 359 aaPredicted RBP16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 ATXN3P54252 364 aaPredicted RBP16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 USP46P62068 366 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 NOP14P78316 857 aaKnown RBP16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 ASIC1P78348 528 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 SLC7A9P82251 487 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 KDSRQ06136 332 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 LMAN2Q12907 356 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 TAF10Q12962 218 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 DHCR24Q15392 516 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 WDR72Q3MJ13 1102 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 HSF5Q4G112 596 aaPredicted RBP16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 ALLCQ8N6M5 410 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 TXNDC5Q8NBS9 432 aaKnown RBP16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 MDGA1Q8NFP4 955 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 CXorf38Q8TB03 319 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 C8orf48Q96LL4 319 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 MED10Q9BTT4 135 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 TTLL2Q9BWV7 592 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 FGFBP2Q9BYJ0 223 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 TNMDQ9H2S6 317 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 SLC32A1Q9H598 525 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 SH3BP1Q9Y3L3 701 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 HELZP42694 1942 aaKnown RBP16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 EML5Q05BV3 1969 aa16.58■□□□□ 0.24
SBDSP1-201ENST00000415772 PTPRJQ12913 1337 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 RTN3O95197 1032 aaPredicted RBP16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 KAT7O95251 611 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 PROS1P07225 676 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 ADH5P11766 374 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 PTPN1P18031 435 aaKnown RBP16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 YWHAQP27348 245 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 EIF2DP41214 584 aaKnown RBP16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 DPP6P42658 865 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 CYP2J2P51589 502 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 SNRNP35Q16560 246 aaKnown RBP16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 SCARA3Q6AZY7 606 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 ARMCX6Q7L4S7 300 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 RASSF3Q86WH2 238 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 ADGRG2Q8IZP9 1017 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 KIAA1958Q8N8K9 716 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 FBXO32Q969P5 355 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 CCDC127Q96BQ5 260 aa16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 MRPL45Q9BRJ2 306 aaKnown RBP16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 NXF1Q9UBU9 619 aaKnown RBP16.57■□□□□ 0.24
SBDSP1-201ENST00000415772 KMT2BQ9UMN6 2715 aaPredicted RBP16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 PATE3B3GLJ2 98 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 EIF3DO15371 548 aaKnown RBP eCLIP16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 STX6O43752 255 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 TACC1O75410 805 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 HSP90AA1P07900 732 aaKnown RBP16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 CEACAM1P13688 526 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 BCKDHBP21953 392 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 GRIA2P42262 883 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 MAPK8P45983 427 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 GAD2Q05329 585 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 SLC39A14Q15043 492 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 TRIM61Q5EBN2 209 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 UNQ6494/PRO21346Q6UXR6 183 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 TRMT11Q7Z4G4 463 aaKnown RBP16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 NUP93Q8N1F7 819 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 HMGB4Q8WW32 186 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 CGRRF1Q99675 332 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 RNF38Q9H0F5 515 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 MTMR6Q9Y217 621 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 MORC2Q9Y6X9 1032 aaPredicted RBP16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 ATG2BQ96BY7 2078 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 KIAA1549LQ6ZVL6 1849 aa16.56■□□□□ 0.24
SBDSP1-201ENST00000415772 SPAG17Q6Q759 2223 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 CACNA1BQ00975 2339 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 TCRBV21S2A2A0A5A6 115 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 TBC1D3BA6NDS4 549 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 GIPC1O14908 333 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 TRIM21P19474 475 aaKnown RBP16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 CSRP1P21291 193 aaKnown RBP16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 SLC6A11P48066 632 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 IRX4P78413 519 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 BIRC3Q13489 604 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 FAM26FQ5R3K3 315 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 NELFCDQ8IXH7 590 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 TMEFF1Q8IYR6 380 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 XXYLT1Q8NBI6 393 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 B3GALNT2Q8NCR0 500 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 RLN3Q8WXF3 142 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 HPS3Q969F9 1004 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 DHX58Q96C10 678 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 OTUB2Q96DC9 234 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 USP28Q96RU2 1077 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 ZNF518BQ9C0D4 1074 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 SPTBN2O15020 2390 aa16.55■□□□□ 0.24
SBDSP1-201ENST00000415772 A0A087X0B3 334 aa16.54■□□□□ 0.24
SBDSP1-201ENST00000415772 E2F8A0AVK6 867 aa16.54■□□□□ 0.24
SBDSP1-201ENST00000415772 CLIC2O15247 247 aa16.54■□□□□ 0.24
SBDSP1-201ENST00000415772 OAS1P00973 400 aaKnown RBP16.54■□□□□ 0.24
SBDSP1-201ENST00000415772 CST3P01034 146 aaPredicted RBP16.54■□□□□ 0.24
SBDSP1-201ENST00000415772 CFIP05156 583 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms