RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 DUS2Q9NX74 493 aaKnown RBP21.76■■□□□ 1.07
PTPRU-203ENST00000415600 ZNF638Q14966 1978 aaKnown RBP21.76■■□□□ 1.07
PTPRU-203ENST00000415600 ZNF292O60281 2723 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 MYL5Q02045 173 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 CCINQ13939 588 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 CCDC142Q17RM4 750 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 SGSM1Q2NKQ1 1148 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.75■■□□□ 1.07
PTPRU-203ENST00000415600 KIAA2013Q8IYS2 634 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 TTC16Q8NEE8 873 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 CCDC26Q8TAB7 109 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 TMC2Q8TDI7 906 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 OSCP1Q8WVF1 389 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 ZNF516Q92618 1163 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 TAF4BQ92750 862 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 IMPG2Q9BZV3 1241 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 TRIM5Q9C035 493 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 XYLT2Q9H1B5 865 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 KCTD10Q9H3F6 313 aa21.75■■□□□ 1.07
PTPRU-203ENST00000415600 RBM12Q9NTZ6 932 aaKnown RBP21.75■■□□□ 1.07
PTPRU-203ENST00000415600 LRRIQ3A6PVS8 624 aaPredicted RBP21.74■■□□□ 1.07
PTPRU-203ENST00000415600 F8VP50 259 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 TADA3O75528 432 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 RTN3O95197 1032 aaPredicted RBP21.74■■□□□ 1.07
PTPRU-203ENST00000415600 RPL13P26373 211 aaKnown RBP21.74■■□□□ 1.07
PTPRU-203ENST00000415600 SATB1Q01826 763 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 CEP135Q66GS9 1140 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 TTLL2Q9BWV7 592 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 HPS4Q9NQG7 708 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 ARHGAP26Q9UNA1 814 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 DENND4CQ5VZ89 1909 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 TRDMT1O14717 391 aaKnown RBP21.74■■□□□ 1.07
PTPRU-203ENST00000415600 MAPK13O15264 365 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 TCF3P15923 654 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 DRD1P21728 446 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 SDHBP21912 280 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 CDC25BP30305 580 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 CASP4P49662 377 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 FBXO43Q4G163 708 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 TMEM196Q5HYL7 178 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 ERMP1Q7Z2K6 904 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 KIAA1958Q8N8K9 716 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 ARL14EPQ8N8R7 260 aaPredicted RBP21.74■■□□□ 1.07
PTPRU-203ENST00000415600 PDZD8Q8NEN9 1154 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 MED10Q9BTT4 135 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 RMND1Q9NWS8 449 aa21.74■■□□□ 1.07
PTPRU-203ENST00000415600 GPR179Q6PRD1 2367 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 RHOBTB3O94955 611 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 NFATC1O95644 943 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 C4BPAP04003 597 aaKnown RBP21.73■■□□□ 1.07
PTPRU-203ENST00000415600 PTMAP06454 111 aaKnown RBP21.73■■□□□ 1.07
PTPRU-203ENST00000415600 TDGF1P13385 188 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 ERCC5P28715 1186 aaPredicted RBP21.73■■□□□ 1.07
PTPRU-203ENST00000415600 HOXA6P31267 233 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 USP4Q13107 963 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 ZNF77Q15935 545 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 TRIM68Q6AZZ1 485 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 LONP2Q86WA8 852 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 CCDC150Q8NCX0 1101 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 SH3RF2Q8TEC5 729 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 MRFAP1L1Q96HT8 127 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 CYP2S1Q96SQ9 504 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 P2RY13Q9BPV8 354 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 ECT2Q9H8V3 914 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 GCNT4Q9P109 453 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 TRAF3IP3Q9Y228 551 aa21.73■■□□□ 1.07
PTPRU-203ENST00000415600 WDR87Q6ZQQ6 2873 aa21.72■■□□□ 1.07
PTPRU-203ENST00000415600 SLC9A3R1O14745 358 aaPredicted RBP21.72■■□□□ 1.07
PTPRU-203ENST00000415600 KRT13P13646 458 aa21.72■■□□□ 1.07
PTPRU-203ENST00000415600 GAS6Q14393 721 aa21.72■■□□□ 1.07
PTPRU-203ENST00000415600 Q6ZS52 159 aa21.72■■□□□ 1.07
PTPRU-203ENST00000415600 INTS8Q75QN2 995 aaKnown RBP21.72■■□□□ 1.07
PTPRU-203ENST00000415600 DDX42Q86XP3 938 aaKnown RBP eCLIP21.72■■□□□ 1.07
PTPRU-203ENST00000415600 NUP93Q8N1F7 819 aa21.72■■□□□ 1.07
PTPRU-203ENST00000415600 C2orf78A6NCI8 922 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 ABL1P00519 1130 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 ARSAP15289 507 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 ENPEPQ07075 957 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 ZACNQ401N2 412 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 LAIR1Q6GTX8 287 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 PRR23BQ6ZRT6 265 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 ENOX1Q8TC92 643 aaKnown RBP21.71■■□□□ 1.07
PTPRU-203ENST00000415600 OVCA2Q8WZ82 227 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 SMARCD1Q96GM5 515 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 ZNF518BQ9C0D4 1074 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 HSD3B7Q9H2F3 369 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 SMYD3Q9H7B4 428 aa21.71■■□□□ 1.07
PTPRU-203ENST00000415600 DMAP1Q9NPF5 467 aaPredicted RBP21.71■■□□□ 1.07
PTPRU-203ENST00000415600 ZNF840PA6NDX5 716 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 NR2F2P24468 414 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 YWHAQP27348 245 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 PIK3CAP42336 1068 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 SIM2Q14190 667 aaPredicted RBP21.7■■□□□ 1.06
PTPRU-203ENST00000415600 NFIL3Q16649 462 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 GUF1Q8N442 669 aaKnown RBP21.7■■□□□ 1.06
PTPRU-203ENST00000415600 SLC22A12Q96S37 553 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 DPEP3Q9H4B8 488 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 SLC8A2Q9UPR5 921 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 OBSL1O75147 1896 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 GOLGA6L6A8MZA4 724 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms