RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 KCNK16Q96T55 309 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 DMAP1Q9NPF5 467 aaPredicted RBP26.53■■□□□ 1.84
HLA-C-204ENST00000415537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.53■■□□□ 1.842e-6■■■■■ 149.1
HLA-C-204ENST00000415537 WNT6Q9Y6F9 365 aa26.53■■□□□ 1.84
HLA-C-204ENST00000415537 TRIM49P0CI25 452 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 TRIM49CP0CI26 452 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 NDST1P52848 882 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 EDRF1Q3B7T1 1238 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 TMEM196Q5HYL7 178 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 SMYD4Q8IYR2 804 aaPredicted RBP26.52■■□□□ 1.84
HLA-C-204ENST00000415537 PDZD8Q8NEN9 1154 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 SECISBP2LQ93073 1101 aaKnown RBP26.52■■□□□ 1.84
HLA-C-204ENST00000415537 FBXO32Q969P5 355 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 EPC1Q9H2F5 836 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 NCDNQ9UBB6 729 aa26.52■■□□□ 1.84
HLA-C-204ENST00000415537 AP1G2O75843 785 aa26.51■■□□□ 1.83
HLA-C-204ENST00000415537 GJA4P35212 333 aa26.51■■□□□ 1.83
HLA-C-204ENST00000415537 ASPAP45381 313 aa26.51■■□□□ 1.83
HLA-C-204ENST00000415537 RNF38Q9H0F5 515 aa26.51■■□□□ 1.83
HLA-C-204ENST00000415537 HOOK1Q9UJC3 728 aaKnown RBP26.51■■□□□ 1.83
HLA-C-204ENST00000415537 LEFTY2O00292 366 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 PAPSS2O95340 614 aaPredicted RBP26.5■■□□□ 1.83
HLA-C-204ENST00000415537 SMC2O95347 1197 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 GALK1P51570 392 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 SLC7A9P82251 487 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 PPP3CAQ08209 521 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 ORC1Q13415 861 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 EML3Q32P44 896 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 ZCWPW2Q504Y3 356 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 FSTL4Q6MZW2 842 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 PAQR9Q6ZVX9 377 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 KIAA2013Q8IYS2 634 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 FUKQ8N0W3 1084 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 CRYBG2Q8N1P7 616 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 OVCA2Q8WZ82 227 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 GSDMAQ96QA5 445 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 P2RY13Q9BPV8 354 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 DNAI2Q9GZS0 605 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 TMEM8AQ9HCN3 771 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 KRT82Q9NSB4 513 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 RAB23Q9ULC3 237 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 SMG5Q9UPR3 1016 aaKnown RBP26.5■■□□□ 1.83
HLA-C-204ENST00000415537 CPQQ9Y646 472 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 ATG2BQ96BY7 2078 aa26.5■■□□□ 1.83
HLA-C-204ENST00000415537 CETN3O15182 167 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 ATG13O75143 517 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 NFATC1O95644 943 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 EPB41P11171 864 aaKnown RBP26.49■■□□□ 1.83
HLA-C-204ENST00000415537 CCDC130P13994 396 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 DRD1P21728 446 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 SLC5A3P53794 718 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 ZNF658Q5TYW1 1059 aaPredicted RBP26.49■■□□□ 1.83
HLA-C-204ENST00000415537 DCLK2Q8N568 766 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 SLC2A14Q8TDB8 520 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 TAS1R2Q8TE23 839 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 CHFRQ96EP1 664 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 LINC00597Q9H2U6 94 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 CYP3A43Q9HB55 503 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 COMMD8Q9NX08 183 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 HMGXB4Q9UGU5 601 aa26.49■■□□□ 1.83
HLA-C-204ENST00000415537 OAS1P00973 400 aaKnown RBP26.48■■□□□ 1.83
HLA-C-204ENST00000415537 MBL2P11226 248 aaPredicted RBP26.48■■□□□ 1.83
HLA-C-204ENST00000415537 GTF2H1P32780 548 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 PRCPP42785 496 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 ZXDBP98169 803 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 KRT39Q6A163 491 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 SCAMP5Q8TAC9 235 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 CD101Q93033 1021 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 SMARCE1Q969G3 411 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 EEF2KMTQ96G04 330 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 TSG101Q99816 390 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 FAM49BQ9NUQ9 324 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 SMPD4Q9NXE4 827 aa26.48■■□□□ 1.83
HLA-C-204ENST00000415537 CHORDC1Q9UHD1 332 aaPredicted RBP26.48■■□□□ 1.83
HLA-C-204ENST00000415537 CHURC1-FNTBB4DL54 471 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 K7ESF4 209 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 STX10O60499 249 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 OLFM2O95897 454 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 EGFP01133 1207 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 FNTBP49356 437 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 FBXO43Q4G163 708 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 DDX42Q86XP3 938 aaKnown RBP eCLIP26.47■■□□□ 1.83
HLA-C-204ENST00000415537 C12orf29Q8N999 325 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 ENGASEQ8NFI3 743 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 NT5C1AQ9BXI3 368 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 GTPBP4Q9BZE4 634 aaKnown RBP26.47■■□□□ 1.83
HLA-C-204ENST00000415537 NIF3L1Q9GZT8 377 aa26.47■■□□□ 1.83
HLA-C-204ENST00000415537 APOBEC3GQ9HC16 384 aaKnown RBP26.47■■□□□ 1.83
HLA-C-204ENST00000415537 SLC9A3R1O14745 358 aaPredicted RBP26.46■■□□□ 1.83
HLA-C-204ENST00000415537 TNFRSF10BO14763 440 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 FAM200BP0CF97 657 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 MAP3K7CLP57077 242 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 INCA1Q0VD86 236 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 HECTD3Q5T447 861 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 HEATR6Q6AI08 1181 aaKnown RBP26.46■■□□□ 1.83
HLA-C-204ENST00000415537 LONP2Q86WA8 852 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 KIAA1958Q8N8K9 716 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 TIGD1Q96MW7 591 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 SMOQ99835 787 aa26.46■■□□□ 1.83
HLA-C-204ENST00000415537 FBXO44Q9H4M3 255 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms