RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 CDH9Q9ULB4 789 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 WNT6Q9Y6F9 365 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 AKAP13Q12802 2813 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 CACNA1BQ00975 2339 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 LEFTY2O00292 366 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 KAT7O95251 611 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 LHX1P48742 406 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 TOB2Q14106 344 aaPredicted RBP6.6□□□□□ -1.35
LMBR1-204ENST00000415428 UBAP2LQ14157 1087 aaKnown RBP6.6□□□□□ -1.35
LMBR1-204ENST00000415428 C6orf118Q5T5N4 469 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 DYMQ7RTS9 669 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 CATSPER3Q86XQ3 398 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 FMNL3Q8IVF7 1028 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 MRGPRX1Q96LB2 322 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 GBP3Q9H0R5 595 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 ITGA11Q9UKX5 1188 aa6.6□□□□□ -1.35
LMBR1-204ENST00000415428 MYMKA6NI61 221 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 PFKFB2O60825 505 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 NCAM1P13591 858 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 PNLIPP16233 465 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 NDUFV2P19404 249 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 PTGER3P43115 390 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 AFF3P51826 1226 aaKnown RBP6.59□□□□□ -1.35
LMBR1-204ENST00000415428 INSM1Q01101 510 aaPredicted RBP6.59□□□□□ -1.35
LMBR1-204ENST00000415428 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 HPS6Q86YV9 775 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 FSIP1Q8NA03 581 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 GEMIN8Q9NWZ8 242 aaKnown RBP6.59□□□□□ -1.35
LMBR1-204ENST00000415428 PARP2Q9UGN5 583 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 DMTF1Q9Y222 760 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 NBEAQ8NFP9 2946 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 WDR87Q6ZQQ6 2873 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 TMEM150BA6NC51 233 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 NTN3O00634 580 aaPredicted RBP6.59□□□□□ -1.35
LMBR1-204ENST00000415428 ALOX15BO15296 676 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 GIMD1P0DJR0 217 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 PLS3P13797 630 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 GJA1P17302 382 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 SAFBQ15424 915 aaKnown RBP eCLIP6.59□□□□□ -1.35
LMBR1-204ENST00000415428 SV2CQ496J9 727 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 XKR9Q5GH70 373 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 BROXQ5VW32 411 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 LRRC69Q6ZNQ3 347 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 BEND5Q7L4P6 421 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 LRRTM3Q86VH5 581 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 TPCN2Q8NHX9 752 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 SPATA20Q8TB22 786 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 TTC17Q96AE7 1141 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 PGBD1Q96JS3 809 aa6.59□□□□□ -1.35
LMBR1-204ENST00000415428 OGTO15294 1046 aa6.59□□□□□ -1.36
LMBR1-204ENST00000415428 ADH5P11766 374 aa6.59□□□□□ -1.36
LMBR1-204ENST00000415428 SPINK2P20155 84 aa6.59□□□□□ -1.36
LMBR1-204ENST00000415428 EPHA8P29322 1005 aaPredicted RBP6.59□□□□□ -1.36
LMBR1-204ENST00000415428 EIF3IQ13347 325 aaKnown RBP6.59□□□□□ -1.36
LMBR1-204ENST00000415428 DCP2Q8IU60 420 aaKnown RBP6.59□□□□□ -1.36
LMBR1-204ENST00000415428 TRIM6Q9C030 488 aaPredicted RBP6.59□□□□□ -1.36
LMBR1-204ENST00000415428 TM7SF3Q9NS93 570 aa6.59□□□□□ -1.36
LMBR1-204ENST00000415428 CALCOCO1Q9P1Z2 691 aa6.59□□□□□ -1.36
LMBR1-204ENST00000415428 PTPRJQ12913 1337 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 DDX39AO00148 427 aaKnown RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 TPP1O14773 563 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 RTN3O95197 1032 aaPredicted RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 PRKCGP05129 697 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 SRGAP2CP0DJJ0 459 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 MYL4P12829 197 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 NPTX2P47972 431 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 IFNAR2P48551 515 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 NXPH1P58417 271 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 ST3GAL1Q11201 340 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 ENOX2Q16206 610 aaKnown RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 HLA-BQ31612 363 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 C12orf56Q8IXR9 622 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 SYT2Q8N9I0 419 aaPredicted RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 RNF169Q8NCN4 708 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 IPO4Q8TEX9 1081 aaKnown RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 MRPS31Q92665 395 aaKnown RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 MAN2B2Q9Y2E5 1009 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 FNDC3AQ9Y2H6 1198 aaKnown RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 PKD1L2Q7Z442 2459 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 GOLGA6L3A6NEY3 463 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 DPYSL4O14531 572 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 KRT38O76015 456 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 SLC12A3P55017 1021 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 RACK1P63244 317 aaKnown RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 NEK5Q6P3R8 708 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 NUDT18Q6ZVK8 323 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 WASF1Q92558 559 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 ZNF560Q96MR9 790 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 CDK5RAP1Q96SZ6 601 aaKnown RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 CDH19Q9H159 772 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 RSPH9Q9H1X1 276 aaPredicted RBP6.58□□□□□ -1.36
LMBR1-204ENST00000415428 TMPRSS4Q9NRS4 437 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 MTMR7Q9Y216 660 aa6.58□□□□□ -1.36
LMBR1-204ENST00000415428 TMX2-CTNND1H3BSU7 103 aa6.57□□□□□ -1.36
LMBR1-204ENST00000415428 DCLK1O15075 740 aa6.57□□□□□ -1.36
LMBR1-204ENST00000415428 MED24O75448 989 aa6.57□□□□□ -1.36
LMBR1-204ENST00000415428 KLF8O95600 359 aaPredicted RBP6.57□□□□□ -1.36
LMBR1-204ENST00000415428 ALCAMQ13740 583 aa6.57□□□□□ -1.36
LMBR1-204ENST00000415428 CRELD2Q6UXH1 353 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms