RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 TEX264Q9Y6I9 313 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 RLFQ13129 1914 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 KRT36O76013 467 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 ERBB2P04626 1255 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 VHLP40337 213 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 PEX19P40855 299 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 KRT72Q14CN4 511 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 TTC7BQ86TV6 843 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 PCYT2Q99447 389 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 TAS2R1Q9NYW7 299 aa18.8■□□□□ 0.6
SCARB1-203ENST00000415380 NXF1Q9UBU9 619 aaKnown RBP18.8■□□□□ 0.6
SCARB1-203ENST00000415380 IGKV6D-21A0A0A0MT36 114 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 OGTO15294 1046 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 MYL2P10916 166 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 MRPS35P82673 323 aaKnown RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 TNFAIP1Q13829 316 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 VPS52Q8N1B4 723 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 MCUR1Q96AQ8 359 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 OXNAD1Q96HP4 312 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 ACO2Q99798 780 aaKnown RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 YIPF3Q9GZM5 350 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 SYNCQ9H7C4 482 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 CPSF3Q9UKF6 684 aaKnown RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 AVILO75366 819 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 TRUB2O95900 331 aaKnown RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 HOXC6P09630 235 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 ESRRAP11474 423 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 SERPINB4P48594 390 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 HMGCS2P54868 508 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 ROR1Q01973 937 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 MMRN1Q13201 1228 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 ORC1Q13415 861 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 KCNJ11Q14654 390 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 DARS2Q6PI48 645 aaKnown RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 PRPF39Q86UA1 669 aaKnown RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 ZC3H18Q86VM9 953 aaKnown RBP18.79■□□□□ 0.6
SCARB1-203ENST00000415380 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.79■□□□□ 0.68e-8■□□□□ 9.4
SCARB1-203ENST00000415380 CFAP61Q8NHU2 1237 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 NRG4Q8WWG1 115 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 TEX13BQ9BXU2 312 aa18.79■□□□□ 0.6
SCARB1-203ENST00000415380 PHIPQ8WWQ0 1821 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 FAM237BA0A1B0GVD1 139 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 E5RJQ4 531 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 FCHO1O14526 889 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 FAM155BO75949 473 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 ICAM3P32942 547 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 HSPA1LP34931 641 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 TUBP50607 506 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 IRX1P78414 480 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-203ENST00000415380 STXBP2Q15833 593 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 SNX30Q5VWJ9 437 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 CCDC62Q6P9F0 684 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 CDHR3Q6ZTQ4 885 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 SCYL3Q8IZE3 742 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 WDR60Q8WVS4 1066 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 LBHD1Q9BQE6 289 aaPredicted RBP18.78■□□□□ 0.6
SCARB1-203ENST00000415380 USP18Q9UMW8 372 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 MED7O43513 233 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 PSMG1O95456 288 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 IL1BP01584 269 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 ZNF280CQ8ND82 737 aa18.78■□□□□ 0.6
SCARB1-203ENST00000415380 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.77■□□□□ 0.6
SCARB1-203ENST00000415380 ABLIM1O14639 778 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 EFNA5P52803 228 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 KLC1Q07866 573 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 CFAP36Q96G28 342 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 SRPK1Q96SB4 655 aaKnown RBP18.77■□□□□ 0.6
SCARB1-203ENST00000415380 RSAD1Q9HA92 442 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 NRBP2Q9NSY0 501 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 ARMCX1Q9P291 453 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 WDR35Q9P2L0 1181 aa18.77■□□□□ 0.6
SCARB1-203ENST00000415380 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.77■□□□□ 0.6
SCARB1-203ENST00000415380 COPEO14579 308 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 CAPN9O14815 690 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 PPP1R12AO14974 1030 aaPredicted RBP18.77■□□□□ 0.59
SCARB1-203ENST00000415380 MAFO75444 373 aaPredicted RBP18.77■□□□□ 0.59
SCARB1-203ENST00000415380 RNF8O76064 485 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 SRGAP2CP0DJJ0 459 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 RARBP10826 455 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 STIP1P31948 543 aaKnown RBP18.77■□□□□ 0.59
SCARB1-203ENST00000415380 CDH8P55286 799 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 NOMO1Q15155 1222 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 SURF1Q15526 300 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 NBPF12Q5TAG4 269 aaPredicted RBP18.77■□□□□ 0.59
SCARB1-203ENST00000415380 ALYREFQ86V81 257 aaKnown RBP18.77■□□□□ 0.59
SCARB1-203ENST00000415380 FAM136AQ96C01 138 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 FAF2Q96CS3 445 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 PEBP4Q96S96 227 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 SYT15Q9BQS2 421 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 NMUR2Q9GZQ4 415 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 ARHGEF4Q9NR80 690 aa18.77■□□□□ 0.59
SCARB1-203ENST00000415380 TRIM49D1C9J1S8 452 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 KLF11O14901 512 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 SPAG6O75602 509 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 C1QAP02745 245 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 PRKCBP05771 671 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 OSTNP61366 133 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 SLC34A1Q06495 639 aa18.76■□□□□ 0.59
SCARB1-203ENST00000415380 TTC39BQ5VTQ0 682 aaPredicted RBP18.76■□□□□ 0.59
SCARB1-203ENST00000415380 SLC26A11Q86WA9 606 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms