RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TBX3O15119 743 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 PRKCBP05771 671 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 FESP07332 822 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 HOXA4Q00056 320 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 KRT17Q04695 432 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 DDX10Q13206 875 aaKnown RBP4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 LLGL1Q15334 1064 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 CNGA2Q16280 664 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 GFOD2Q3B7J2 385 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 ZIK1Q3SY52 487 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 PCID2Q5JVF3 399 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 RNF220Q5VTB9 566 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 SWSAP1Q6NVH7 229 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 SLC29A4Q7RTT9 530 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 COL23A1Q86Y22 540 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 IZUMO1Q8IYV9 350 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 OSCP1Q8WVF1 389 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 SOCS4Q8WXH5 440 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 DPF1Q92782 380 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 REPS1Q96D71 796 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 FSD1LQ9BXM9 530 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 FLRT1Q9NZU1 646 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 UACAQ9BZF9 1416 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 BICRAQ9NZM4 1560 aa4.43□□□□□ -1.7
HMGB3P23-201ENST00000414981 EFCAB5A4FU69 1503 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 HFM1A2PYH4 1435 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 TRIM43BA6NCK2 446 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 CGB1A6NKQ9 187 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 ZBED1O96006 694 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 ERBB2P04626 1255 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 CDK4P11802 303 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 MYF5P13349 255 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 FMO1Q01740 532 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 SRSF4Q08170 494 aaKnown RBP4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 CCNIQ14094 377 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 INSCQ1MX18 579 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 C4orf46Q504U0 113 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 HSP90AB2PQ58FF8 381 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 ZKSCAN2Q63HK3 967 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 DARS2Q6PI48 645 aaKnown RBP4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 APOA5Q6Q788 366 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 Q6ZWC4 215 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 AKNAQ7Z591 1439 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 C11orf96Q7Z7L8 435 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 MICU3Q86XE3 530 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 RAB11FIP4Q86YS3 637 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 MPP5Q8N3R9 675 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 LRRC71Q8N4P6 559 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 BPIFB1Q8TDL5 484 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 MAML1Q92585 1016 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 SPSB4Q96A44 273 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 TRIM43Q96BQ3 446 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 APIPQ96GX9 242 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 THAP7Q9BT49 309 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 TRIM5Q9C035 493 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 SEMA4CQ9C0C4 833 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 CPNE7Q9UBL6 633 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 SERGEFQ9UGK8 458 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 G3BP2Q9UN86 482 aaKnown RBP4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 ADAMTS5Q9UNA0 930 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 TNFRSF18Q9Y5U5 241 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 NCAPD3P42695 1498 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 NCOA2Q15596 1464 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 FYCO1Q9BQS8 1478 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 ZBED9Q6R2W3 1325 aa4.42□□□□□ -1.7
HMGB3P23-201ENST00000414981 CFAP43Q8NDM7 1665 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 TONSLQ96HA7 1378 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 MBD3L4A6NDZ8 208 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 MBD3L3A6NE82 208 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 MANSC4A6NHS7 340 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 LINC01548A6NM66 108 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 A6NNZ2 444 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 PYCARD-AS1I3L0S3 204 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 GOLIM4O00461 696 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 CCP110O43303 1012 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 LATS1O95835 1130 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 CELA2AP08217 269 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 NPSP0C0P6 89 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 ENGP17813 658 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 RPL17P18621 184 aaKnown RBP4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 CLCN2P51788 898 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 PRKAG1P54619 331 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 RHBDL3P58872 404 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 SLC10A2Q12908 348 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 GRM1Q13255 1194 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 MYBPC2Q14324 1141 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 GBX1Q14549 363 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 DEPDC1Q5TB30 811 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 DCAF12L1Q5VU92 463 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 ABHD11Q8NFV4 315 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 TTC8Q8TAM2 541 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 XAGE5Q8WWM1 108 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 RAPGEF4Q8WZA2 1011 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 R3HDM4Q96D70 268 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 PPP1R9BQ96SB3 815 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 LRRC27Q9C0I9 530 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 DHX36Q9H2U1 1008 aaKnown RBP4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 SACM1LQ9NTJ5 587 aa4.41□□□□□ -1.7
HMGB3P23-201ENST00000414981 STK32BQ9NY57 414 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms