RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 STX16-NPEPL1H3BU86 382 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 STX16O14662 325 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 GNB5O14775 395 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 MT-ND5P03915 603 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 DNTTP04053 509 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 HSP90AB1P08238 724 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 AKR1B1P15121 316 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 PECAM1P16284 738 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 TGM1P22735 817 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SLC6A9P48067 706 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 HK3P52790 923 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 UCP3P55916 312 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 YBEYP58557 167 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 ZP2Q05996 745 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 PPP2R5CQ13362 524 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SNAPC2Q13487 334 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 EPHA7Q15375 998 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SLC30A10Q6XR72 485 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 UBE2Q1Q7Z7E8 422 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 CPLX4Q7Z7G2 160 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 STK11IPQ8N1F8 1099 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 OR56A3Q8NH54 315 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SCAMP5Q8TAC9 235 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 RFFLQ8WZ73 363 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 DLG3Q92796 817 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 NSUN4Q96CB9 384 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 HIST1H2AHQ96KK5 128 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 HIST1H2AJQ99878 128 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 PCDHAC1Q9H158 963 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 CXorf56Q9H5V9 222 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ZNF552Q9H707 407 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 GREM2Q9H772 168 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 DNAJC18Q9H819 358 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 CHODLQ9H9P2 273 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 RNF186Q9NXI6 227 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ZFP69BQ9UJL9 534 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 MID2Q9UJV3 735 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 COL15A1P39059 1388 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 N4BP3O15049 544 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ANP32CO43423 234 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 AMY1AP04745 511 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SRFP11831 508 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 OXCT1P55809 520 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 TSTQ16762 297 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 RAP1GAP2Q684P5 730 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 ZNF783Q6ZMS7 281 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 NDUFAF2Q8N183 169 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 Q8N1Y9 231 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 C17orf53Q8N3J3 647 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 TEX9Q8N6V9 391 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 OR6B3Q8NGW1 331 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 SHKBP1Q8TBC3 707 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 PIWIL2Q8TC59 973 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 IRF7Q92985 503 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 EID2BQ96D98 161 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 LIN37Q96GY3 246 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 FAM46AQ96IP4 442 aaKnown RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 MXD3Q9BW11 206 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 MS4A7Q9GZW8 240 aaPredicted RBP2.85□□□□□ -1.95
MCF2-204ENST00000414978 ARHGAP20Q9P2F6 1191 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 FTSJ1Q9UET6 329 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 HS3ST4Q9Y661 456 aa2.85□□□□□ -1.95
MCF2-204ENST00000414978 FADS2P1A8MWK0 482 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 KIF28PB7ZC32 967 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 H0YIN7 160 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 BOLA2-SMG1P6H3BVE0 249 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 GRM6O15303 877 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 HOXC11O43248 304 aaPredicted RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 RTN3O95197 1032 aaPredicted RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 GLI1P08151 1106 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 RFC4P35249 363 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 CARSP49589 748 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 CCR9P51686 369 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 ARFIP2P53365 341 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 HSD17B7P56937 341 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 DBPQ10586 325 aaPredicted RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 NFIAQ12857 509 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 DCTN2Q13561 401 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 RAB30Q15771 203 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 KRT40Q6A162 431 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 CYP4F22Q6NT55 531 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 BBS12Q6ZW61 710 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 TXNRD3Q86VQ6 643 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 CYP2W1Q8TAV3 490 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 FAM71BQ8TC56 605 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 USP13Q92995 863 aaPredicted RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 RADILQ96JH8 1075 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 MAML3Q96JK9 1138 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 DESI2Q9BSY9 194 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 DPH1Q9BZG8 443 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 GPR62Q9BZJ7 368 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 XPO4Q9C0E2 1151 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 ARHGAP39Q9C0H5 1083 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 BTBD7Q9P203 1132 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 MKL2Q9ULH7 1088 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 GPR34Q9UPC5 381 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 MRPS17Q9Y2R5 130 aaKnown RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 NUMBLQ9Y6R0 609 aa2.84□□□□□ -1.95
MCF2-204ENST00000414978 COL11A1P12107 1806 aaPredicted RBP2.84□□□□□ -1.95
MCF2-204ENST00000414978 MATN4O95460 622 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms