RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SHC4Q6S5L8 630 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 TMEM173Q86WV6 379 aaPredicted RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 ZNF280BQ86YH2 543 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 GRAMD1CQ8IYS0 662 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 LRRC43Q8N309 656 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 MYCT1Q8N699 235 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 DTWD2Q8NBA8 298 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 COLGALT1Q8NBJ5 622 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 RABGGTAQ92696 567 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 UTP4Q969X6 686 aaKnown RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 DHX58Q96C10 678 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 ZBTB45Q96K62 511 aaPredicted RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 Q96M66 194 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 GAD1Q99259 594 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 ASPSCR1Q9BZE9 553 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 CCSER1Q9C0I3 900 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 TMEM117Q9H0C3 514 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 C2orf40Q9H1Z8 148 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 IKZF4Q9H2S9 585 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 FZD8Q9H461 694 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 ELAC1Q9H777 363 aaKnown RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 RSAD1Q9HA92 442 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 CHST12Q9NRB3 414 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 TBC1D13Q9NVG8 400 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 PRMT7Q9NVM4 692 aaPredicted RBP5.33□□□□□ -1.56
VPS41-205ENST00000414632 MIOSQ9NXC5 875 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 TBC1D7Q9P0N9 293 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 CACNG4Q9UBN1 327 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 DNAJB4Q9UDY4 337 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 PCDHA7Q9UN72 937 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 GDAQ9Y2T3 454 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 VWA8A3KMH1 1905 aa5.33□□□□□ -1.56
VPS41-205ENST00000414632 A0A0C4DFX4 3053 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 A0A1B0GUA9 196 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 A0A1B0GVL5 298 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ARL5CA6NH57 179 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 MYMKA6NI61 221 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 TISP43B9A030 160 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 C9orf172C9J069 976 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 F8W810 466 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 H3BNC9 293 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 K7ERI5 159 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ACKR2O00590 384 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 N4BP3O15049 544 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 POLR2DO15514 142 aaKnown RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 GPR39O43194 453 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 PPP6R2O75170 966 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 TBCAO75347 108 aaKnown RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 OFD1O75665 1012 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 FGF18O76093 207 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 RECQL4O94761 1208 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 DDHD2O94830 711 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 GSNP06396 782 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 PLS3P13797 630 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 IDEP14735 1019 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 AXLP30530 894 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 DDIT3P35638 169 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 MATR3P43243 847 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS41-205ENST00000414632 SCNN1BP51168 640 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 BCAR1P56945 870 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 KRT85P78386 507 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 TFF2Q03403 129 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 RNASELQ05823 741 aaKnown RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 POU5F1BQ06416 359 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ITKQ08881 620 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 NFKBIBQ15653 356 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 NFE2Q16621 373 aaPredicted RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 ZNF568Q3ZCX4 644 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ZC2HC1CQ53FD0 456 aaPredicted RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 NOMO2Q5JPE7 1267 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 GLRA4Q5JXX5 417 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 SFRP5Q5T4F7 317 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ATF7IP2Q5U623 682 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 PIK3R6Q5UE93 754 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 PLPP4Q5VZY2 271 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ZCCHC8Q6NZY4 707 aaKnown RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 PAOXQ6QHF9 649 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 GLB1LQ6UWU2 654 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 EP400NLQ6ZTU2 488 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 FAM214BQ7L5A3 538 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 MRPL10Q7Z7H8 261 aaKnown RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 ADGRD2Q7Z7M1 963 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 RBM23Q86U06 439 aaKnown RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 SFR1Q86XK3 245 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 FAM20CQ8IXL6 584 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 THNSL1Q8IYQ7 743 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 BEND7Q8N7W2 519 aaPredicted RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 TMEM161BQ8NDZ6 487 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 GIMAP7Q8NHV1 300 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 URGCPQ8TCY9 931 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 KCNG4Q8TDN1 519 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 FRS2Q8WU20 508 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 BCL7CQ8WUZ0 217 aaPredicted RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 POF1BQ8WVV4 589 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 AUTS2Q8WXX7 1259 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 USP7Q93009 1102 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 HPS3Q969F9 1004 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 PGBD4Q96DM1 585 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 BICD1Q96G01 975 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 COX4I2Q96KJ9 171 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms