RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 EHD2Q9NZN4 543 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 HMGXB4Q9UGU5 601 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 SLC8A2Q9UPR5 921 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 CPQQ9Y646 472 aa16.53■□□□□ 0.24
ACTB-202ENST00000414620 ATP8B3O60423 1300 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 PDXKO00764 312 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 CALUO43852 315 aaPredicted RBP16.52■□□□□ 0.24
ACTB-202ENST00000414620 MBL2P11226 248 aaPredicted RBP16.52■□□□□ 0.24
ACTB-202ENST00000414620 PIK3CAP42336 1068 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 CLDN10P78369 228 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 PUM1Q14671 1186 aaKnown RBP eCLIP16.52■□□□□ 0.247e-11■■■■□ 21
ACTB-202ENST00000414620 ACOT1Q86TX2 421 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 WDR5BQ86VZ2 330 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 NUP93Q8N1F7 819 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 RPLP0P6Q8NHW5 317 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 EZH1Q92800 747 aaPredicted RBP16.52■□□□□ 0.24
ACTB-202ENST00000414620 CCDC47Q96A33 483 aaKnown RBP16.52■□□□□ 0.24
ACTB-202ENST00000414620 SLITRK1Q96PX8 696 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 HHIPQ96QV1 700 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 MMRN2Q9H8L6 949 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 KRT82Q9NSB4 513 aa16.52■□□□□ 0.24
ACTB-202ENST00000414620 NFATC1O95644 943 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 OAS1P00973 400 aaKnown RBP16.51■□□□□ 0.23
ACTB-202ENST00000414620 MYL1P05976 194 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 TRIM49P0CI25 452 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 TRIM49CP0CI26 452 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 CCDC130P13994 396 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 TCF3P15923 654 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 DRD1P21728 446 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 TGM1P22735 817 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 YWHAQP27348 245 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 DPYDQ12882 1025 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 ZACNQ401N2 412 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 C1orf220Q5T0J3 134 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 PAQR9Q6ZVX9 377 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 SV2AQ7L0J3 742 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 FILIP1Q7Z7B0 1213 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 GPR161Q8N6U8 529 aaKnown RBP16.51■□□□□ 0.23
ACTB-202ENST00000414620 FBXO32Q969P5 355 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 TNIP3Q96KP6 325 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
ACTB-202ENST00000414620 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.51■□□□□ 0.23
ACTB-202ENST00000414620 ZNF292O60281 2723 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 FAM237AA0A1B0GTK4 181 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 MED19A0JLT2 244 aaPredicted RBP16.5■□□□□ 0.23
ACTB-202ENST00000414620 ANTXRLA6NF34 631 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 ATG13O75143 517 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 AP1G2O75843 785 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 RHOBTB3O94955 611 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 OLFM2O95897 454 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 PFKLP17858 780 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 NR2F2P24468 414 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 CNR2P34972 360 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 NDST1P52848 882 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 SLC5A3P53794 718 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 SEC13P55735 322 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 SLC7A9P82251 487 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 FOXK2Q01167 660 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 LMNB2Q03252 620 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 NR1H3Q13133 447 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 KRBA2Q6ZNG9 492 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 FAM160A2Q8N612 972 aaPredicted RBP16.5■□□□□ 0.23
ACTB-202ENST00000414620 SCAMP5Q8TAC9 235 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 TMC2Q8TDI7 906 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 EXOC4Q96A65 974 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 DMAP1Q9NPF5 467 aaPredicted RBP16.5■□□□□ 0.23
ACTB-202ENST00000414620 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 DLL3Q9NYJ7 618 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 CFAP97Q9P2B7 532 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 TRAF3IP3Q9Y228 551 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 DMXL1Q9Y485 3027 aa16.5■□□□□ 0.23
ACTB-202ENST00000414620 AKAP3O75969 853 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 BEST1O76090 585 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 RTN3O95197 1032 aaPredicted RBP16.49■□□□□ 0.23
ACTB-202ENST00000414620 CYP17A1P05093 508 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 RETP07949 1114 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 CCDC192P0DO97 292 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 P4HA1P13674 534 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 OPRD1P41143 372 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 ASPAP45381 313 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 PPP3CCP48454 512 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 VAMP7P51809 220 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 FUKQ8N0W3 1084 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 SLC2A14Q8TDB8 520 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 JAKMIP2Q96AA8 810 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 GMIPQ9P107 970 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 CHORDC1Q9UHD1 332 aaPredicted RBP16.49■□□□□ 0.23
ACTB-202ENST00000414620 CDV3Q9UKY7 258 aaKnown RBP16.49■□□□□ 0.23
ACTB-202ENST00000414620 THADAQ6YHU6 1953 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 SDK1Q7Z5N4 2213 aa16.49■□□□□ 0.23
ACTB-202ENST00000414620 NUP205Q92621 2012 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 A0A1W2PQ27 194 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 A0A1W2PQ64 194 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 A0A1W2PQD8 194 aa16.48■□□□□ 0.23
ACTB-202ENST00000414620 RPP40O75818 363 aaKnown RBP16.48■□□□□ 0.23
ACTB-202ENST00000414620 ZNF202O95125 648 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms