RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SP100P23497 879 aaPredicted RBP17.4■□□□□ 0.38
LINC00398-201ENST00000414407 PLA2G4AP47712 749 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 PDE4CQ08493 712 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 TEAD2Q15562 447 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 RAB41Q5JT25 222 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 ING5Q8WYH8 240 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 MRPS31Q92665 395 aaKnown RBP17.4■□□□□ 0.38
LINC00398-201ENST00000414407 SPAG5Q96R06 1193 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 TASP1Q9H6P5 420 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 IGSF9Q9P2J2 1179 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 USP3Q9Y6I4 520 aa17.4■□□□□ 0.38
LINC00398-201ENST00000414407 TCF20Q9UGU0 1960 aaKnown RBP17.4■□□□□ 0.38
LINC00398-201ENST00000414407 NRG2O14511 850 aaPredicted RBP17.39■□□□□ 0.37
LINC00398-201ENST00000414407 THAP12O43422 761 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 TADA3O75528 432 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 GJA1P17302 382 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 SSTR3P32745 418 aaPredicted RBP17.39■□□□□ 0.37
LINC00398-201ENST00000414407 STAT1P42224 750 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 KIF11P52732 1056 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 TAF10Q12962 218 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 FIGNQ5HY92 759 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 SNX30Q5VWJ9 437 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 MTSS1LQ765P7 747 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 PIGZQ86VD9 579 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 MON1AQ86VX9 555 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 FMNL3Q8IVF7 1028 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 SCAMP5Q8TAC9 235 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 SLC35F5Q8WV83 523 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 KCTD13Q8WZ19 329 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 MCRS1Q96EZ8 462 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 EDEM3Q9BZQ6 932 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 TRPV4Q9HBA0 871 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 NLRC4Q9NPP4 1024 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 TRPM5Q9NZQ8 1165 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 MYO6Q9UM54 1294 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 PCDHGC3Q9UN70 934 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 SCML2Q9UQR0 700 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 GREB1Q4ZG55 1949 aa17.39■□□□□ 0.37
LINC00398-201ENST00000414407 ZNF840PA6NDX5 716 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 M0QYV0 167 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 CBFA2T2O43439 604 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 ZDHHC11BP0C7U3 371 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 SOX5P35711 763 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 PBX1P40424 430 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 GPD2P43304 727 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 GPR158Q5T848 1215 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 GPRIN1Q7Z2K8 1008 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 SLC47A2Q86VL8 602 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 UBA3Q8TBC4 463 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 STK32AQ8WU08 396 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 SMARCD2Q92925 531 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 FBXO32Q969P5 355 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 IQCDQ96DY2 449 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 HSFY1Q96LI6 401 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 ASB16Q96NS5 453 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 NECAB3Q96P71 396 aaPredicted RBP17.38■□□□□ 0.37
LINC00398-201ENST00000414407 NUP58Q9BVL2 599 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 SLITRK6Q9H5Y7 841 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 CD320Q9NPF0 282 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 ACP6Q9NPH0 428 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 IFNKQ9P0W0 207 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 LIMD1Q9UGP4 676 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 DOCK8Q8NF50 2099 aa17.38■□□□□ 0.37
LINC00398-201ENST00000414407 CALCAP01258 141 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 PNMA6AP0CW24 399 aaPredicted RBP17.37■□□□□ 0.37
LINC00398-201ENST00000414407 CYP11B1P15538 503 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 RPL34P49207 117 aaKnown RBP17.37■□□□□ 0.37
LINC00398-201ENST00000414407 PDE6CP51160 858 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 CYP4F8P98187 520 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 HTR4Q13639 388 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 POTEHQ6S545 545 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 CCDC186Q7Z3E2 898 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 ZNF677Q86XU0 584 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 RNF135Q8IUD6 432 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 SCML4Q8N228 414 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 ZSCAN18Q8TBC5 510 aaPredicted RBP17.37■□□□□ 0.37
LINC00398-201ENST00000414407 SECISBP2LQ93073 1101 aaKnown RBP17.37■□□□□ 0.37
LINC00398-201ENST00000414407 E2F7Q96AV8 911 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 ZSWIM3Q96MP5 696 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 SLC46A2Q9BY10 475 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 LHX5Q9H2C1 402 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 KCNK12Q9HB15 430 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 A0A0C4DFX4 3053 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 PATJQ8NI35 1801 aa17.37■□□□□ 0.37
LINC00398-201ENST00000414407 TULP2O00295 520 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 ECI2O75521 394 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 CCDC172P0C7W6 258 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 KRT9P35527 623 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 PSEN1P49768 467 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 TUBP50607 506 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 IFRD2Q12894 506 aaPredicted RBP17.36■□□□□ 0.37
LINC00398-201ENST00000414407 FAM78AQ5JUQ0 283 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 STXBP5Q5T5C0 1151 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 TXNDC8Q6A555 127 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 PM20D1Q6GTS8 502 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 CMTM8Q8IZV2 173 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 ELSPBP1Q96BH3 223 aa17.36■□□□□ 0.37
LINC00398-201ENST00000414407 XPO4Q9C0E2 1151 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms