RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 MROH9Q5TGP6 573 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 FAM160B2Q86V87 743 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 KCTD6Q8NC69 237 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 TMEM174Q8WUU8 243 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 IFT43Q96FT9 208 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 DHRS4Q9BTZ2 278 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 ANKEF1Q9NU02 776 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 HERC5Q9UII4 1024 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 DRG1Q9Y295 367 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 ZNF200P98182 395 aaPredicted RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 DPYSL3Q14195 570 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 LBRQ14739 615 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 DLGAP5Q15398 846 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 POLNQ7Z5Q5 900 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 USP37Q86T82 979 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 RSPH3Q86UC2 560 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 PDIK1LQ8N165 341 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 SPATA18Q8TC71 538 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 NTPCRQ9BSD7 190 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 VPS11Q9H270 941 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 EBF3Q9H4W6 596 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 IL1RAPL1Q9NZN1 696 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 ARHGAP28Q9P2N2 729 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 SLC7A8Q9UHI5 535 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 K7ERI5 159 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 RNASEH1O60930 286 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 ANPEPP15144 967 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 GARTP22102 1010 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 EPHB1P54762 984 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 MRPS5P82675 430 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 SP2Q02086 613 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 SLC25A11Q02978 314 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 RBBP5Q15291 538 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 TRMT10BQ6PF06 316 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 DARS2Q6PI48 645 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 GATA6Q92908 595 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 ZNF184Q99676 751 aaPredicted RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 CYP4F11Q9HBI6 524 aa15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 STX18Q9P2W9 335 aaKnown RBP15.22■□□□□ 0.03
SEMA3F-202ENST00000413852 COPEO14579 308 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 C6orf222P0C671 652 aaPredicted RBP15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 KDELR1P24390 212 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 SLC18A1P54219 525 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 SH2D5Q6ZV89 423 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 ATG4CQ96DT6 458 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 APOPT1Q96IL0 206 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 PIWIL1Q96J94 861 aaKnown RBP15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 APOL6Q9BWW8 343 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 CPSF2Q9P2I0 782 aaKnown RBP15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 HMGXB4Q9UGU5 601 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 HEY1Q9Y5J3 304 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 LYNP07948 512 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 GRIA1P42261 906 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 RTP1P59025 263 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 PDE1BQ01064 536 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 CFAP157Q5JU67 520 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 SLC27A3Q5K4L6 730 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 RNF111Q6ZNA4 994 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 ULK2Q8IYT8 1036 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 MPP5Q8N3R9 675 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 CEP120Q8N960 986 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 PPFIBP2Q8ND30 876 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 MOCOSQ96EN8 888 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 CPXM1Q96SM3 734 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 VCXQ9H320 206 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 RAB6BQ9NRW1 208 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 ETAA1Q9NY74 926 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 STRIP2Q9ULQ0 834 aa15.21■□□□□ 0.03
SEMA3F-202ENST00000413852 LRRC37AA6NMS7 1700 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 A0A0B4J269 797 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 ARHGAP42A6NI28 874 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 STAM2O75886 525 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 GJB1P08034 283 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 NR3C2P08235 984 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 KRT3P12035 628 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 JAK3P52333 1124 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 PSMC1P62191 440 aaKnown RBP15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 EMC2Q15006 297 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 C15orf59Q2T9L4 293 aaPredicted RBP15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 KLHL38Q2WGJ6 581 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 ATG14Q6ZNE5 492 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 SCUBE1Q8IWY4 988 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 GALNT15Q8N3T1 639 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 PEBP4Q96S96 227 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 FOXP3Q9BZS1 431 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 IQCGQ9H095 443 aaKnown RBP15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 PLAC1Q9HBJ0 212 aa15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 MTO1Q9Y2Z2 717 aaKnown RBP15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 CTDP1Q9Y5B0 961 aaPredicted RBP15.21■□□□□ 0.02
SEMA3F-202ENST00000413852 TM9SF1O15321 606 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 ITM2AO43736 263 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 CSDE1O75534 798 aaKnown RBP15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 LMNAP02545 664 aaKnown RBP15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 ACTR2P61160 394 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 CRADDP78560 199 aa15.2■□□□□ 0.02
SEMA3F-202ENST00000413852 OCRLQ01968 901 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms