RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 RUNX3Q13761 415 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 MTF1Q14872 753 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 PON2Q15165 354 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 CC2D1AQ6P1N0 951 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-207ENST00000413642 ASCL5Q7RTU5 278 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 RALGPS2Q86X27 583 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-207ENST00000413642 CCDC150Q8NCX0 1101 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 NELFBQ8WX92 580 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 ARID3AQ99856 593 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 EHD2Q9NZN4 543 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 ARMCX3Q9UH62 379 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-207ENST00000413642 CHORDC1Q9UHD1 332 aaPredicted RBP27.91■■■□□ 2.06
VEGFA-207ENST00000413642 WNT6Q9Y6F9 365 aa27.91■■■□□ 2.06
VEGFA-207ENST00000413642 LAMTOR5O43504 91 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 MAGEA9P43362 315 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 SLC5A3P53794 718 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 MAP3K7CLP57077 242 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 USP4Q13107 963 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 CAMK4Q16566 473 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 ZNF394Q53GI3 561 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 TTI2Q6NXR4 508 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 TSSK4Q6SA08 328 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 FBXO32Q969P5 355 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 SLC35C1Q96A29 364 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 CHFRQ96EP1 664 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 NT5C1AQ9BXI3 368 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 CHRDQ9H2X0 955 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 ARHGAP26Q9UNA1 814 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 CTNND2Q9UQB3 1225 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 PTPRDP23468 1912 aa27.9■■■□□ 2.06
VEGFA-207ENST00000413642 GFRA3O60609 400 aa27.89■■■□□ 2.06
VEGFA-207ENST00000413642 STX17P56962 302 aa27.89■■■□□ 2.06
VEGFA-207ENST00000413642 UBE2HP62256 183 aa27.89■■■□□ 2.06
VEGFA-207ENST00000413642 CSTF1Q05048 431 aaKnown RBP27.89■■■□□ 2.06
VEGFA-207ENST00000413642 GAS6Q14393 721 aa27.89■■■□□ 2.06
VEGFA-207ENST00000413642 SLITRK1Q96PX8 696 aa27.89■■■□□ 2.06
VEGFA-207ENST00000413642 HNRNPABQ99729 332 aaKnown RBP27.89■■■□□ 2.06
VEGFA-207ENST00000413642 LINC00597Q9H2U6 94 aa27.89■■■□□ 2.06
VEGFA-207ENST00000413642 SMPD4Q9NXE4 827 aa27.89■■■□□ 2.06
VEGFA-207ENST00000413642 OBSL1O75147 1896 aa27.89■■■□□ 2.05
VEGFA-207ENST00000413642 RTN3O95197 1032 aaPredicted RBP27.88■■■□□ 2.05
VEGFA-207ENST00000413642 PGFP49763 221 aa27.88■■■□□ 2.05
VEGFA-207ENST00000413642 JAKMIP2Q96AA8 810 aa27.88■■■□□ 2.05
VEGFA-207ENST00000413642 CYFIP2Q96F07 1278 aa27.88■■■□□ 2.05
VEGFA-207ENST00000413642 MSANTD3Q96H12 275 aa27.88■■■□□ 2.05
VEGFA-207ENST00000413642 CSNK1G1Q9HCP0 422 aa27.88■■■□□ 2.05
VEGFA-207ENST00000413642 DUS2Q9NX74 493 aaKnown RBP27.88■■■□□ 2.05
VEGFA-207ENST00000413642 IL37Q9NZH6 218 aa27.88■■■□□ 2.05
VEGFA-207ENST00000413642 SCAMP3O14828 347 aaKnown RBP27.87■■■□□ 2.05
VEGFA-207ENST00000413642 OAS1P00973 400 aaKnown RBP27.87■■■□□ 2.05
VEGFA-207ENST00000413642 PPP3CCP48454 512 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 NAIF1Q69YI7 327 aaPredicted RBP27.87■■■□□ 2.05
VEGFA-207ENST00000413642 Q6ZS52 159 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 GPRIN1Q7Z2K8 1008 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 FILIP1Q7Z7B0 1213 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 OSCP1Q8WVF1 389 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 CISHQ9NSE2 258 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 GMIPQ9P107 970 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 COQ4Q9Y3A0 265 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 CPQQ9Y646 472 aa27.87■■■□□ 2.05
VEGFA-207ENST00000413642 LEFTY2O00292 366 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 OLFM2O95897 454 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 FAM200BP0CF97 657 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 SLC7A9P82251 487 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 LRMPQ12912 555 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 PDGFRLQ15198 375 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 CCDC40Q4G0X9 1142 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 CLEC20AQ6ZU45 233 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 NKD2Q969F2 451 aaPredicted RBP27.86■■■□□ 2.05
VEGFA-207ENST00000413642 CEP63Q96MT8 703 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 DENND4CQ5VZ89 1909 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 F5P12259 2224 aa27.86■■■□□ 2.05
VEGFA-207ENST00000413642 GREB1Q4ZG55 1949 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 MIA3Q5JRA6 1907 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 PRR23AA6NEV1 266 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 HHLA1C9JL84 531 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 ANP32AP39687 249 aaKnown RBP27.85■■■□□ 2.05
VEGFA-207ENST00000413642 PPP1R2P41236 205 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 IFNAR2P48551 515 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 EML3Q32P44 896 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 PPP1R26Q5T8A7 1209 aaPredicted RBP27.85■■■□□ 2.05
VEGFA-207ENST00000413642 C1orf228Q6PIY5 440 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 HEXIM2Q96MH2 286 aaKnown RBP27.85■■■□□ 2.05
VEGFA-207ENST00000413642 FBRSL1Q9HCM7 1045 aaKnown RBP27.85■■■□□ 2.05
VEGFA-207ENST00000413642 FBXO4Q9UKT5 387 aa27.85■■■□□ 2.05
VEGFA-207ENST00000413642 MBL2P11226 248 aaPredicted RBP27.84■■■□□ 2.05
VEGFA-207ENST00000413642 TCF3P15923 654 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 PFKLP17858 780 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 PDE6CP51160 858 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 RAD23BP54727 409 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 SLC4A11Q8NBS3 891 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 PDZD8Q8NEN9 1154 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 CCSER2Q9H7U1 834 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 ECT2Q9H8V3 914 aa27.84■■■□□ 2.05
VEGFA-207ENST00000413642 METTL14Q9HCE5 456 aaKnown RBP27.84■■■□□ 2.05
VEGFA-207ENST00000413642 PRMT8Q9NR22 394 aaPredicted RBP27.84■■■□□ 2.05
VEGFA-207ENST00000413642 FAM92AA1XBS5 289 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 COCHO43405 550 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 GJA4P35212 333 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 FMO5P49326 533 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms