RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 GABPB1Q06547 395 aaPredicted RBP18.09■□□□□ 0.49
PTPRC-206ENST00000413409 NNTQ13423 1086 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 SGSM1Q2NKQ1 1148 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 EMBQ6PCB8 327 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 EFCAB13Q8IY85 973 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 EIF1ADQ8N9N8 165 aaKnown RBP18.09■□□□□ 0.49
PTPRC-206ENST00000413409 GPR152Q8TDT2 470 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 ZSWIM1Q9BR11 485 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 PDZD7Q9H5P4 517 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 SLITRK6Q9H5Y7 841 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 GDF3Q9NR23 364 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 DMGDHQ9UI17 866 aaKnown RBP18.09■□□□□ 0.49
PTPRC-206ENST00000413409 CDV3Q9UKY7 258 aaKnown RBP18.09■□□□□ 0.49
PTPRC-206ENST00000413409 IRAK3Q9Y616 596 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 ALG6Q9Y672 507 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 C2orf16Q68DN1 1984 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 FRYQ5TBA9 3013 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 EVPLQ92817 2033 aa18.09■□□□□ 0.49
PTPRC-206ENST00000413409 A0A087WZ62 844 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 PRR5-ARHGAP8B1AHC4 643 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 NOMO3P69849 1222 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 ARHGAP8P85298 464 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 CDC42EP1Q00587 391 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 TRPC3Q13507 836 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 IFT20Q8IY31 132 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 MCOLN2Q8IZK6 566 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.08■□□□□ 0.49
PTPRC-206ENST00000413409 CD101Q93033 1021 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 ELMO3Q96BJ8 720 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 VCPIP1Q96JH7 1222 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 KRT12Q99456 494 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 OSMRQ99650 979 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 FDXACB1Q9BRP7 624 aaPredicted RBP18.08■□□□□ 0.49
PTPRC-206ENST00000413409 RTKNQ9BST9 563 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 FOXQ1Q9C009 403 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 SFXN1Q9H9B4 322 aa18.08■□□□□ 0.49
PTPRC-206ENST00000413409 CNOT8Q9UFF9 292 aaKnown RBP18.08■□□□□ 0.49
PTPRC-206ENST00000413409 ZFYVE26Q68DK2 2539 aa18.08■□□□□ 0.48
PTPRC-206ENST00000413409 BHMG1C9JSJ3 638 aaPredicted RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 ATMINO43313 823 aaPredicted RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 HOXA2O43364 376 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 HEXIM1O94992 359 aaKnown RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 LSM8O95777 96 aaKnown RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 HOXB3P14651 431 aaPredicted RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 NSFP46459 744 aaKnown RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 BCAR1P56945 870 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 KIZQ2M2Z5 673 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 ZNF699Q32M78 642 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 DCAF12L1Q5VU92 463 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 TMEM270Q6UE05 265 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 MON1BQ7L1V2 547 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 ECHDC2Q86YB7 292 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 PHF13Q86YI8 300 aaPredicted RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 HDAC7Q8WUI4 952 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 BCL7CQ8WUZ0 217 aaPredicted RBP18.07■□□□□ 0.48
PTPRC-206ENST00000413409 CAVIN3Q969G5 261 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 ASB7Q9H672 318 aa18.07■□□□□ 0.48
PTPRC-206ENST00000413409 GOLGA6L10A0A0M3HER8 536 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 CCDC66A2RUB6 948 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 KRIT1O00522 736 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 CXCL8P10145 99 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 MYBL2P10244 700 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 CTSAP10619 480 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 SRFP11831 508 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 COMTP21964 271 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 CTNNA1P35221 906 aaKnown RBP18.06■□□□□ 0.48
PTPRC-206ENST00000413409 CRYBB1P53674 252 aaPredicted RBP18.06■□□□□ 0.48
PTPRC-206ENST00000413409 MYL6P60660 151 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 FAM193AP78312 1265 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 TFAMQ00059 246 aaKnown RBP18.06■□□□□ 0.48
PTPRC-206ENST00000413409 LMNB2Q03252 620 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
PTPRC-206ENST00000413409 PCBP1Q15365 356 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTPRC-206ENST00000413409 LIN9Q5TKA1 542 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 NAA35Q5VZE5 725 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 APBB1IPQ7Z5R6 666 aaPredicted RBP18.06■□□□□ 0.48
PTPRC-206ENST00000413409 ABI1Q8IZP0 508 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 VN1R3Q9BXE9 311 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 XYLT2Q9H1B5 865 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 PARD6AQ9NPB6 346 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 ZZEF1O43149 2961 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 CEP295Q9C0D2 2601 aa18.06■□□□□ 0.48
PTPRC-206ENST00000413409 RAD51CO43502 376 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 TSPAN1O60635 241 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 GPR32O75388 356 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 VTNP04004 478 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 TNNT3P45378 269 aaPredicted RBP18.05■□□□□ 0.48
PTPRC-206ENST00000413409 AARSP49588 968 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTPRC-206ENST00000413409 MESDQ14696 234 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 DCAF4L1Q3SXM0 396 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 NT5DC4Q86YG4 428 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 CEP120Q8N960 986 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 RNF169Q8NCN4 708 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 PJA1Q8NG27 643 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 NLRP7Q8WX94 980 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 ALG3Q92685 438 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 FAM212AQ96EL1 285 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 TMEM169Q96HH4 297 aa18.05■□□□□ 0.48
PTPRC-206ENST00000413409 ZNF668Q96K58 619 aaPredicted RBP18.05■□□□□ 0.48
PTPRC-206ENST00000413409 MYADMQ96S97 322 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms