RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 CSF2RAP15509 400 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 RAG1P15918 1043 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 PDGFRAP16234 1089 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 BDNFP23560 247 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 RFC2P35250 354 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 RPL34P49207 117 aaKnown RBP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 NDUFV1P49821 464 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 TSPY1Q01534 308 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 KCTD19Q17RG1 926 aaPredicted RBP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 RAB6CQ53S08 254 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 SH3PXD2AQ5TCZ1 1133 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 CCDC70Q6NSX1 233 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 FAM171BQ6P995 826 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 FBXO38Q6PIJ6 1188 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 TMCO2Q7Z6W1 182 aaPredicted RBP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 LRRTM3Q86VH5 581 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 SLC13A5Q86YT5 568 aaPredicted RBP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 CRIPAKQ8N1N5 446 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 ARFGAP1Q8N6T3 406 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 NIPA2Q8N8Q9 360 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 ZMIZ2Q8NF64 920 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 UBE2Q2Q8WVN8 375 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 KHSRPQ92945 711 aaKnown RBP eCLIP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 B3GALT6Q96L58 329 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 HSFY1Q96LI6 401 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 CFAP57Q96MR6 1250 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 KCNK16Q96T55 309 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 PKMYT1Q99640 499 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 MRPL9Q9BYD2 267 aaKnown RBP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 RAB6CQ9H0N0 254 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 DDX47Q9H0S4 455 aaKnown RBP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 TMEM30AQ9NV96 361 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 ASNSD1Q9NWL6 643 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 MARCH5Q9NX47 278 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 PCSK1NQ9UHG2 260 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 ADAM28Q9UKQ2 775 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 TTC7AQ9ULT0 858 aaPredicted RBP10.45□□□□□ -0.74
FAM238B-201ENST00000413288 NR2E1Q9Y466 385 aa10.45□□□□□ -0.74
FAM238B-201ENST00000413288 BRCA2P51587 3418 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 CCDC188H7C350 402 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 KIAA0355O15063 1070 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 MAP3K13O43283 966 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 TRAPPC3O43617 180 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 LRCH4O75427 683 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 RNF8O76064 485 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 GALTP07902 379 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 EN2P19622 333 aaPredicted RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 TKTL1P51854 596 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 ZNF143P52747 638 aaPredicted RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 DEFB103AP81534 67 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 ATP11AP98196 1134 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 SMC1AQ14683 1233 aaKnown RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 HADHQ16836 314 aaKnown RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 SMTNL2Q2TAL5 461 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 CCDC14Q49A88 953 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 ODF2Q5BJF6 829 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 VARS2Q5ST30 1063 aaKnown RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 FAM171A1Q5VUB5 890 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 FUT10Q6P4F1 479 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 FAM43BQ6ZT52 329 aaPredicted RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 GPRIN1Q7Z2K8 1008 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 ZDHHC17Q8IUH5 632 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 KATNAL2Q8IYT4 538 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 ZDHHC14Q8IZN3 488 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 SIX6OS1Q8N1H7 587 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 LRRC43Q8N309 656 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 FNIP1Q8TF40 1166 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 HDAC7Q8WUI4 952 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 SMARCD1Q96GM5 515 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 NAP1L3Q99457 506 aaPredicted RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 TMEM175Q9BSA9 504 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 HERPUD2Q9BSE4 406 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 PLVAPQ9BX97 442 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 GPR62Q9BZJ7 368 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 ULBP1Q9BZM6 244 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 MCOLN1Q9GZU1 580 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 NGRNQ9NPE2 291 aaKnown RBP10.44□□□□□ -0.74
FAM238B-201ENST00000413288 CYLDQ9NQC7 956 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 PLXNA3P51805 1871 aa10.44□□□□□ -0.74
FAM238B-201ENST00000413288 GOLGA6L10A0A0M3HER8 536 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 LRRD1A4D1F6 860 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 HHLA1C9JL84 531 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 DPYSL4O14531 572 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 RAD51CO43502 376 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 DGKIO75912 1065 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 ZRANB2O95218 330 aaKnown RBP eCLIP10.43□□□□□ -0.74
FAM238B-201ENST00000413288 TRUB2O95900 331 aaKnown RBP10.43□□□□□ -0.74
FAM238B-201ENST00000413288 AMHP03971 560 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 RARAP10276 462 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 RALAP11233 206 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 H2AFXP16104 143 aaPredicted RBP10.43□□□□□ -0.74
FAM238B-201ENST00000413288 TFE3P19532 575 aaPredicted RBP10.43□□□□□ -0.74
FAM238B-201ENST00000413288 IL1R2P27930 398 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 MIPP30301 263 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 SDC4P31431 198 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 ARPP19P56211 112 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 VSNL1P62760 191 aa10.43□□□□□ -0.74
FAM238B-201ENST00000413288 MRPS5P82675 430 aaKnown RBP10.43□□□□□ -0.74
FAM238B-201ENST00000413288 SLC25A11Q02978 314 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms