RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 SPATA18Q8TC71 538 aa17.24■□□□□ 0.35
HCG18-233ENST00000412685 PPP1R13LQ8WUF5 828 aa17.24■□□□□ 0.35
HCG18-233ENST00000412685 P3H4Q92791 437 aa17.24■□□□□ 0.35
HCG18-233ENST00000412685 KAT2BQ92831 832 aa17.24■□□□□ 0.35
HCG18-233ENST00000412685 C18orf25Q96B23 403 aaPredicted RBP17.24■□□□□ 0.35
HCG18-233ENST00000412685 OSMRQ99650 979 aa17.24■□□□□ 0.35
HCG18-233ENST00000412685 MAK16Q9BXY0 300 aaKnown RBP17.24■□□□□ 0.35
HCG18-233ENST00000412685 FAM49BQ9NUQ9 324 aa17.24■□□□□ 0.35
HCG18-233ENST00000412685 TCP11X1B4DZS4 312 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 POC1B-GALNT4F8VUJ3 575 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
HCG18-233ENST00000412685 PRPSAP2O60256 369 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 BANF1O75531 89 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 SMIM10L2AP0DMW4 78 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 SMIM10L2BP0DMW5 78 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 CDC42EP1Q00587 391 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 GAD2Q05329 585 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 ADCY1Q08828 1119 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 ITIH4Q14624 930 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 SPRED3Q2MJR0 410 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 NOTUMQ6P988 496 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 OLFML1Q6UWY5 402 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 NAT8LQ8N9F0 302 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 BEST2Q8NFU1 509 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 CKAP2Q8WWK9 683 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 CCT6BQ92526 530 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 H0YHG0 523 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 ARL4CP56559 192 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 SF3A3Q12874 501 aaKnown RBP eCLIP17.23■□□□□ 0.354e-17■■□□□ 12.4
HCG18-233ENST00000412685 NR1H3Q13133 447 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 DPYSL3Q14195 570 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 ANKRD20A8PQ5CZ79 823 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 GLRA4Q5JXX5 417 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 TAB3Q8N5C8 712 aaPredicted RBP17.23■□□□□ 0.35
HCG18-233ENST00000412685 LRRC52Q8N7C0 313 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 GDAP1Q8TB36 358 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 PTPN18Q99952 460 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 PHACTR1Q9C0D0 580 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 ACTR5Q9H9F9 607 aaPredicted RBP17.23■□□□□ 0.35
HCG18-233ENST00000412685 NKIRAS1Q9NYS0 192 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 NME7Q9Y5B8 376 aa17.23■□□□□ 0.35
HCG18-233ENST00000412685 NRCAMQ92823 1304 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 RALGAPA2Q2PPJ7 1873 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 A6NJR5 290 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 F2P00734 622 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 ATP11AP98196 1134 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 CCDC14Q49A88 953 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 NPNTQ6UXI9 565 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 ARHGEF18Q6ZSZ5 1173 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 TRABD2AQ86V40 505 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 SLC4A5Q9BY07 1137 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 NXF3Q9H4D5 531 aaKnown RBP17.22■□□□□ 0.35
HCG18-233ENST00000412685 DNM1LO00429 736 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 SETSIPP0DME0 302 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 DARSP14868 501 aaKnown RBP17.22■□□□□ 0.35
HCG18-233ENST00000412685 TFDP2Q14188 446 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 NOMO1Q15155 1222 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 MSS51Q4VC12 460 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 FNBP1LQ5T0N5 605 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 PPP1R21Q6ZMI0 780 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 TMEM110Q86TL2 294 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 SLC35F5Q8WV83 523 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 FGFR1OP2Q9NVK5 253 aa17.22■□□□□ 0.35
HCG18-233ENST00000412685 SLC15A5A6NIM6 579 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 CCT8L1PA6NM43 557 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 DPYSL4O14531 572 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 SNX3O60493 162 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 RECQL4O94761 1208 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 CYP2C9P11712 490 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 STX2P32856 288 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 GPX6P59796 221 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 LACTB2Q53H82 288 aaPredicted RBP17.21■□□□□ 0.35
HCG18-233ENST00000412685 FAM47CQ5HY64 1035 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 ALKAL1Q6UXT8 129 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 SCUBE3Q8IX30 993 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 PYROXD1Q8WU10 500 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 TRIM6Q9C030 488 aaPredicted RBP17.21■□□□□ 0.35
HCG18-233ENST00000412685 KDM4CQ9H3R0 1056 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 NGRNQ9NPE2 291 aaKnown RBP17.21■□□□□ 0.35
HCG18-233ENST00000412685 RNF19AQ9NV58 838 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 HESX1Q9UBX0 185 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 CLUHO75153 1309 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 SMIM35A0A1B0GVV1 85 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 TCRBV7S3A2A0A539 114 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 MBLAC1A4D2B0 266 aaPredicted RBP17.21■□□□□ 0.35
HCG18-233ENST00000412685 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 TMEM63AO94886 807 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 SLC6A3Q01959 620 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 ROR1Q01973 937 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 KRT81Q14533 505 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.35
HCG18-233ENST00000412685 C9orf57Q5W0N0 161 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 FBXW10Q5XX13 1052 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 SCYL2Q6P3W7 929 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 ZC3H18Q86VM9 953 aaKnown RBP17.21■□□□□ 0.35
HCG18-233ENST00000412685 SESTD1Q86VW0 696 aa17.21■□□□□ 0.35
HCG18-233ENST00000412685 MAP7D3Q8IWC1 876 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms