RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 RASSF6Q6ZTQ3 369 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ACTRT2Q8TDY3 377 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 POLR3FQ9H1D9 316 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TLR7Q9NYK1 1049 aaKnown RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ARHGEF5Q12774 1597 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TMEM120BA0PK00 339 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 EFCAB10A6NFE3 127 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 SNX4O95219 450 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 HPCAL1P37235 193 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 DPYDQ12882 1025 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TMEM132DQ14C87 1099 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ERFEQ4G0M1 354 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ATP6AP1LQ52LC2 224 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 INO80DQ53TQ3 878 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 NFRKBQ6P4R8 1299 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 KLHL17Q6TDP4 642 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 STX12Q86Y82 276 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 MYO1HQ8N1T3 1032 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 RPRD1AQ96P16 312 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ERP44Q9BS26 406 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 WDR12Q9GZL7 423 aaKnown RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 CCDC177Q9NQR7 707 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 CCDC59Q9P031 241 aaKnown RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TMEM216Q9P0N5 145 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 PTPRTO14522 1441 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 BCLAF3A2AJT9 711 aaKnown RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 AIM2O14862 343 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 HOXA2O43364 376 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 S100A6P06703 90 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 GRK4P32298 578 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 NPY2RP49146 381 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 GFPT1Q06210 699 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 DNAJC3Q13217 504 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TMEM132BQ14DG7 1078 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 RCN1Q15293 331 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TCEA2Q15560 299 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 VPS72Q15906 364 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 KIZQ2M2Z5 673 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TRIM48Q8IWZ4 208 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 OTUD7AQ8TE49 926 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 CENPIQ92674 756 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 MYLPFQ96A32 169 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 CCSER1Q9C0I3 900 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 A0A1W2PRG6 482 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 H7C4K7 107 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 PTGER2P43116 358 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 MSLNQ13421 630 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ERAP2Q6P179 960 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 KYQ8NBH2 561 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 PHC3Q8NDX5 983 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 IL17REQ8NFR9 667 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 FICDQ9BVA6 458 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 CROCC2H7BZ55 1655 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ITGA2P17301 1181 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 PTPN4P29074 926 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 LRRC41Q15345 812 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 SAMD4BQ5PRF9 694 aaKnown RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 TTC23Q5W5X9 447 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ZNF655Q8N720 491 aaPredicted RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 MYDGFQ969H8 173 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 CENPTQ96BT3 561 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 SLITRK1Q96PX8 696 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 THUMPD3Q9BV44 507 aaKnown RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 ZNF341Q9BYN7 854 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 DDX47Q9H0S4 455 aaKnown RBP7.63□□□□□ -1.19
PTPN3-203ENST00000412145 VCPKMTQ9H867 229 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 BARHL2Q9NY43 387 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 HSPBP1Q9NZL4 362 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 PCDHA10Q9Y5I2 948 aa7.63□□□□□ -1.19
PTPN3-203ENST00000412145 CFAP65Q6ZU64 1925 aaKnown RBP7.62□□□□□ -1.19
PTPN3-203ENST00000412145 MROH7-TTC4A0A0A0MT08 1334 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 MROH7Q68CQ1 1323 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 ARHGEF40Q8TER5 1519 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 A0A1B0GTH6 734 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 LSM8O95777 96 aaKnown RBP7.62□□□□□ -1.19
PTPN3-203ENST00000412145 APOC1P02654 83 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 CYP2C9P11712 490 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 NQO1P15559 274 aaKnown RBP7.62□□□□□ -1.19
PTPN3-203ENST00000412145 OLR1P78380 273 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 EN1Q05925 392 aaPredicted RBP7.62□□□□□ -1.19
PTPN3-203ENST00000412145 LGALS3BPQ08380 585 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 PLD1Q13393 1074 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 TMEM26Q6ZUK4 368 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 ARHGAP22Q7Z5H3 698 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 CLYBLQ8N0X4 340 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 ATP6V0D2Q8N8Y2 350 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 HDAC7Q8WUI4 952 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 LPAR1Q92633 364 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 SPASTQ9UBP0 616 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 AFF4Q9UHB7 1163 aaKnown RBP7.62□□□□□ -1.19
PTPN3-203ENST00000412145 MAPK9P45984 424 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 CASP4P49662 377 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 NUDT2P50583 147 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 CCR3P51677 355 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 TRIM25Q14258 630 aaKnown RBP7.62□□□□□ -1.19
PTPN3-203ENST00000412145 EPHA7Q15375 998 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 CACTIN-AS1Q8N1I8 211 aa7.62□□□□□ -1.19
PTPN3-203ENST00000412145 TFB1MQ8WVM0 346 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms