RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 PRR23BQ6ZRT6 265 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 PAQR9Q6ZVX9 377 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 NUP93Q8N1F7 819 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 CPA6Q8N4T0 437 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ZBTB44Q8NCP5 570 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 SLC2A14Q8TDB8 520 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 TAS1R2Q8TE23 839 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 OSCP1Q8WVF1 389 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 RUBCNQ92622 972 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 CCDC34Q96HJ3 373 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 TNIP3Q96KP6 325 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 SLITRK1Q96PX8 696 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 TTLL2Q9BWV7 592 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ECT2Q9H8V3 914 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 KRT82Q9NSB4 513 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 SMG5Q9UPR3 1016 aaKnown RBP12.32□□□□□ -0.44
LINC00963-201ENST00000412141 CPQQ9Y646 472 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 ATP8B3O60423 1300 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 PATJQ8NI35 1801 aa12.32□□□□□ -0.44
LINC00963-201ENST00000412141 DENND4CQ5VZ89 1909 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 SOBPA7XYQ1 873 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 LEFTY2O00292 366 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 IKBKBO14920 756 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 ASS1P00966 412 aaKnown RBP12.31□□□□□ -0.44
LINC00963-201ENST00000412141 TDGF1P13385 188 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 GJA4P35212 333 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 ID4P47928 161 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 NRLP54845 237 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 MAP3K7CLP57077 242 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
LINC00963-201ENST00000412141 NUCB2P80303 420 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 USP4Q13107 963 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 CCINQ13939 588 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 EML3Q32P44 896 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
LINC00963-201ENST00000412141 FUKQ8N0W3 1084 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 FMR1NBQ8N0W7 255 aaPredicted RBP12.31□□□□□ -0.44
LINC00963-201ENST00000412141 P2RY13Q9BPV8 354 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 IMPG2Q9BZV3 1241 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
LINC00963-201ENST00000412141 DMAP1Q9NPF5 467 aaPredicted RBP12.31□□□□□ -0.44
LINC00963-201ENST00000412141 EHD2Q9NZN4 543 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 CFAP97Q9P2B7 532 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 ARHGAP26Q9UNA1 814 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 SPTBN2O15020 2390 aa12.31□□□□□ -0.44
LINC00963-201ENST00000412141 OBSL1O75147 1896 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 RNF40O75150 1001 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 BEST1O76090 585 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 RTN3O95197 1032 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-201ENST00000412141 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-201ENST00000412141 PRCPP42785 496 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 ASPAP45381 313 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 SLC5A3P53794 718 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 FOXK2Q01167 660 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 AMPD2Q01433 879 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 FILIP1Q7Z7B0 1213 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 TMEM174Q8WUU8 243 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 TAF4BQ92750 862 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 NELL1Q92832 810 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 ATP2A3Q93084 1043 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 SMARCD1Q96GM5 515 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 TWNKQ96RR1 684 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 SMOQ99835 787 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 CCSER2Q9H7U1 834 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 GMIPQ9P107 970 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
LINC00963-201ENST00000412141 FANCMQ8IYD8 2048 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 K7ESF4 209 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 TRDMT1O14717 391 aaKnown RBP12.29□□□□□ -0.44
LINC00963-201ENST00000412141 CETN3O15182 167 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 COCHO43405 550 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 HRO43593 1189 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 LILRB5O75023 590 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 SMC2O95347 1197 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 IRF1P10914 325 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 EPB41P11171 864 aaKnown RBP12.29□□□□□ -0.44
LINC00963-201ENST00000412141 PGFP49763 221 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 PDE6CP51160 858 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 SEC13P55735 322 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 NR1H3Q13133 447 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 SIM2Q14190 667 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-201ENST00000412141 ZCWPW2Q504Y3 356 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-201ENST00000412141 CEP68Q76N32 757 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 CRYBG2Q8N1P7 616 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 CCDC150Q8NCX0 1101 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 ZMIZ2Q8NF64 920 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 ENGASEQ8NFI3 743 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 SEMA4DQ92854 862 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 SMARCE1Q969G3 411 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 CEP295NLQ96MC4 621 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 FAM126AQ9BYI3 521 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-201ENST00000412141 NIF3L1Q9GZT8 377 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 NACA2Q9H009 215 aa12.29□□□□□ -0.44
LINC00963-201ENST00000412141 TMEM8AQ9HCN3 771 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms