RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 LRRC27Q9C0I9 530 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 HSPBP1Q9NZL4 362 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 BCCIPQ9P287 314 aaKnown RBP eCLIP17.81■□□□□ 0.44
MRPL55-220ENST00000411464 CFAP97Q9P2B7 532 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 ANK1P16157 1881 aa17.81■□□□□ 0.44
MRPL55-220ENST00000411464 A0A087X0B3 334 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 SCAMP3O14828 347 aaKnown RBP17.8■□□□□ 0.44
MRPL55-220ENST00000411464 KAT7O95251 611 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 OLFM2O95897 454 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 FAM163BP0C2L3 166 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 DLATP10515 647 aaKnown RBP17.8■□□□□ 0.44
MRPL55-220ENST00000411464 MBL2P11226 248 aaPredicted RBP17.8■□□□□ 0.44
MRPL55-220ENST00000411464 PTPN1P18031 435 aaKnown RBP17.8■□□□□ 0.44
MRPL55-220ENST00000411464 TNNI1P19237 187 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 GRIA2P42262 883 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 LMAN2Q12907 356 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 RESTQ13127 1097 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 BYSLQ13895 437 aaKnown RBP17.8■□□□□ 0.44
MRPL55-220ENST00000411464 EOGTQ5NDL2 527 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 RHBDF2Q6PJF5 856 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 UNQ6494/PRO21346Q6UXR6 183 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 PDILTQ8N807 584 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 IL17RCQ8NAC3 791 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 RDH13Q8NBN7 331 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 OLIG1Q8TAK6 271 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 RLN3Q8WXF3 142 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 FNBP1Q96RU3 617 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 ELOVL4Q9GZR5 314 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 ARHGEF4Q9NR80 690 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 TBC1D14Q9P2M4 693 aa17.8■□□□□ 0.44
MRPL55-220ENST00000411464 CHD6Q8TD26 2715 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 CEP295Q9C0D2 2601 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 FRYQ5TBA9 3013 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-220ENST00000411464 C1QTNF9BB2RNN3 333 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 TACC1O75410 805 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 OAS1P00973 400 aaKnown RBP17.79■□□□□ 0.44
MRPL55-220ENST00000411464 CST3P01034 146 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-220ENST00000411464 C1QTNF9P0C862 333 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 P2RY2P41231 377 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 TNFRSF4P43489 277 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 TNNC1P63316 161 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 IFRD2Q12894 506 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-220ENST00000411464 CUL4AQ13619 759 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 SLC39A14Q15043 492 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 SNRNP35Q16560 246 aaKnown RBP17.79■□□□□ 0.44
MRPL55-220ENST00000411464 WDR72Q3MJ13 1102 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 TRIM61Q5EBN2 209 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 EMC10Q5UCC4 262 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 TMEFF1Q8IYR6 380 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 PGBD3Q8N328 593 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 GLIS3Q8NEA6 775 aa17.79■□□□□ 0.44
MRPL55-220ENST00000411464 NUSAP1Q9BXS6 441 aaKnown RBP17.79■□□□□ 0.44
MRPL55-220ENST00000411464 EVLQ9UI08 416 aaPredicted RBP17.79■□□□□ 0.44
MRPL55-220ENST00000411464 TCHHQ07283 1943 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 ATG2BQ96BY7 2078 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 SPAG17Q6Q759 2223 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 A0A0A0MRY4 1105 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 SGK1O00141 431 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 ADH5P11766 374 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 HNRNPLP14866 589 aaKnown RBP eCLIP17.78■□□□□ 0.44
MRPL55-220ENST00000411464 SYT1P21579 422 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 YWHAQP27348 245 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 TRPC3Q13507 836 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 SYT12Q8IV01 421 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 SFTPA1Q8IWL2 248 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 NUP93Q8N1F7 819 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 PDZD8Q8NEN9 1154 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 HMGB4Q8WW32 186 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 CCDC127Q96BQ5 260 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 ZNF518BQ9C0D4 1074 aa17.78■□□□□ 0.44
MRPL55-220ENST00000411464 MORC2Q9Y6X9 1032 aaPredicted RBP17.78■□□□□ 0.44
MRPL55-220ENST00000411464 E2F8A0AVK6 867 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 A8MXQ7 604 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 RTN3O95197 1032 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-220ENST00000411464 SPINK2P20155 84 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 HOXD13P35453 343 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 DPP6P42658 865 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 KIR2DL1P43626 348 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-220ENST00000411464 AMPD3Q01432 767 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 GAD2Q05329 585 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 KDSRQ06136 332 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 MESP2Q0VG99 397 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 PREPLQ4J6C6 727 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-220ENST00000411464 SPDYCQ5MJ68 293 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 LY6G5CQ5SRR4 150 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 BTBD8Q5XKL5 378 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 NUDT18Q6ZVK8 323 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 ARMCX6Q7L4S7 300 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 C12orf40Q86WS4 652 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 USP28Q96RU2 1077 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 TNMDQ9H2S6 317 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 DPEP3Q9H4B8 488 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 SLC32A1Q9H598 525 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 RALYQ9UKM9 306 aaKnown RBP17.77■□□□□ 0.44
MRPL55-220ENST00000411464 ZMIZ1Q9ULJ6 1067 aa17.77■□□□□ 0.44
MRPL55-220ENST00000411464 TCRBV21S2A2A0A5A6 115 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms