RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SP5Q6BEB4 398 aaPredicted RBP5.98□□□□□ -1.45
LSM5-206ENST00000409987 SFRP4Q6FHJ7 346 aaPredicted RBP5.98□□□□□ -1.45
LSM5-206ENST00000409987 LVRNQ6Q4G3 990 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 PALM2Q8IXS6 379 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 TMEM171Q8WVE6 324 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 EXTL1Q92935 676 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 SKA1Q96BD8 255 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 NEUROD6Q96NK8 337 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 ISCA1Q9BUE6 129 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 TMEM120AQ9BXJ8 343 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 GBA2Q9HCG7 927 aaPredicted RBP5.98□□□□□ -1.45
LSM5-206ENST00000409987 TMEM8AQ9HCN3 771 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 SAGE1Q9NXZ1 904 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 SERTAD3Q9UJW9 196 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 CNOT11Q9UKZ1 510 aaKnown RBP5.98□□□□□ -1.45
LSM5-206ENST00000409987 SCAF8Q9UPN6 1271 aaKnown RBP5.98□□□□□ -1.45
LSM5-206ENST00000409987 GPR52Q9Y2T5 361 aa5.98□□□□□ -1.45
LSM5-206ENST00000409987 CD3EAPO15446 510 aaKnown RBP5.97□□□□□ -1.45
LSM5-206ENST00000409987 RGS10O43665 173 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 TRIAP1O43715 76 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 CDKL5O76039 1030 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 ITGA5P08648 1049 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 DDX6P26196 483 aaKnown RBP eCLIP5.97□□□□□ -1.45
LSM5-206ENST00000409987 ADORA2AP29274 412 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 SP2Q02086 613 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 FOXO1Q12778 655 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 E2F2Q14209 437 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 CDSNQ15517 529 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 HYIQ5T013 277 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 FAXCQ5TGI0 409 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 ICE2Q659A1 982 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 LIN54Q6MZP7 749 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 MRNIPQ6NTE8 343 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 KRT73Q86Y46 540 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 SLC15A3Q8IY34 581 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 SPARTQ8N0X7 666 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 CLASRPQ8N2M8 674 aaKnown RBP5.97□□□□□ -1.45
LSM5-206ENST00000409987 ZNF276Q8N554 614 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 TRAPPC12Q8WVT3 735 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 LTV1Q96GA3 475 aaPredicted RBP5.97□□□□□ -1.45
LSM5-206ENST00000409987 TBATAQ96M53 351 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 FAM227BQ96M60 508 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 SORBS1Q9BX66 1292 aaKnown RBP5.97□□□□□ -1.45
LSM5-206ENST00000409987 KRTAP3-1Q9BYR8 98 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 AMBRA1Q9C0C7 1298 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 ZNF703Q9H7S9 590 aaPredicted RBP5.97□□□□□ -1.45
LSM5-206ENST00000409987 ZBTB26Q9HCK0 441 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 SMPD4Q9NXE4 827 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 FBXO2Q9UK22 296 aaPredicted RBP5.97□□□□□ -1.45
LSM5-206ENST00000409987 TESMINQ9Y4I5 508 aa5.97□□□□□ -1.45
LSM5-206ENST00000409987 TRGV11A0A075B6L2 103 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 UNC119BA6NIH7 251 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 ADM5C9JUS6 153 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 ASNA1O43681 348 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 RNASEH2AO75792 299 aaKnown RBP5.96□□□□□ -1.46
LSM5-206ENST00000409987 SPDEFO95238 335 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 ARP10275 920 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 HGFP14210 728 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 BMPR1AP36894 532 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 HNRNPMP52272 730 aaKnown RBP eCLIP5.96□□□□□ -1.46
LSM5-206ENST00000409987 POSTNQ15063 836 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 USP39Q53GS9 565 aaKnown RBP5.96□□□□□ -1.46
LSM5-206ENST00000409987 C1orf210Q8IVY1 113 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 COLGALT2Q8IYK4 626 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 FUBP1Q96AE4 644 aaKnown RBP5.96□□□□□ -1.46
LSM5-206ENST00000409987 TBC1D20Q96BZ9 403 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 FAM136AQ96C01 138 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 SLC25A32Q9H2D1 315 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 INTS13Q9NVM9 706 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 PARPBPQ9NWS1 579 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 VPS51Q9UID3 782 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 DTNAQ9Y4J8 743 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 SNX14Q9Y5W7 946 aa5.96□□□□□ -1.46
LSM5-206ENST00000409987 TMEM200CA6NKL6 621 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 PCDH17O14917 1159 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 COQ9O75208 318 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 PDHA1P08559 390 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 PPP3CBP16298 524 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 NPPBP16860 134 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 SLC5A2P31639 672 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 UQCRC1P31930 480 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 PDE6CP51160 858 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 BCAT1P54687 386 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 NSUN2Q08J23 767 aaKnown RBP eCLIP5.95□□□□□ -1.46
LSM5-206ENST00000409987 SCAPQ12770 1279 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 TBX2Q13207 712 aaPredicted RBP5.95□□□□□ -1.46
LSM5-206ENST00000409987 SPDYAQ5MJ70 313 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 CERCAMQ5T4B2 595 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 DEPDC1Q5TB30 811 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 ARMC6Q6NXE6 501 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 JMJD6Q6NYC1 403 aaPredicted RBP5.95□□□□□ -1.46
LSM5-206ENST00000409987 MZT2AQ6P582 158 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 CCDC89Q8N998 374 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 C1orf131Q8NDD1 294 aaKnown RBP5.95□□□□□ -1.46
LSM5-206ENST00000409987 STT3BQ8TCJ2 826 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 SLC25A43Q8WUT9 341 aaPredicted RBP5.95□□□□□ -1.46
LSM5-206ENST00000409987 ATG4AQ8WYN0 398 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 EID2BQ96D98 161 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 MYEOVQ96EZ4 313 aa5.95□□□□□ -1.46
LSM5-206ENST00000409987 ZBTB45Q96K62 511 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms