RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 TM7SF3Q9NS93 570 aa11.34□□□□□ -0.59
CCDC148-203ENST00000409889 UNC79Q9P2D8 2635 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 TEX51A0A1B0GUA7 166 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.33□□□□□ -0.6
CCDC148-203ENST00000409889 PLK4O00444 970 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 FLRT2O43155 660 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 NDUFS2O75306 463 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 CILPO75339 1184 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 CTDNEP1O95476 244 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 ADH1CP00326 375 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 ADRB2P07550 413 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 ZNF883P0CG24 379 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 ADH5P11766 374 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 HLA-EP13747 358 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 NDUFV2P19404 249 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 EIF2S3P41091 472 aaKnown RBP11.33□□□□□ -0.6
CCDC148-203ENST00000409889 WASP42768 502 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 FOSBP53539 338 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 SMTNP53814 917 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 TMEM132DQ14C87 1099 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 SMAD1Q15797 465 aaKnown RBP11.33□□□□□ -0.6
CCDC148-203ENST00000409889 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 PHTF2Q8N3S3 785 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 ZCCHC9Q8N567 271 aaKnown RBP11.33□□□□□ -0.6
CCDC148-203ENST00000409889 RHBDD1Q8TEB9 315 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 FOXJ1Q92949 421 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 NXPE2Q96DL1 559 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 NTPCRQ9BSD7 190 aaKnown RBP11.33□□□□□ -0.6
CCDC148-203ENST00000409889 CCSER1Q9C0I3 900 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 ABCB6Q9NP58 842 aa11.33□□□□□ -0.6
CCDC148-203ENST00000409889 FNDC3AQ9Y2H6 1198 aaKnown RBP11.33□□□□□ -0.6
CCDC148-203ENST00000409889 A0A1B0GTW7 788 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 A0A1W2PQF6 199 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 CAPN8A6NHC0 703 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 MEI4A8MW99 385 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 E9PAM4 449 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 SLC9A3R1O14745 358 aaPredicted RBP11.32□□□□□ -0.6
CCDC148-203ENST00000409889 HNRNPDLO14979 420 aaKnown RBP11.32□□□□□ -0.6
CCDC148-203ENST00000409889 OGTO15294 1046 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
CCDC148-203ENST00000409889 TLX3O43711 291 aaPredicted RBP11.32□□□□□ -0.6
CCDC148-203ENST00000409889 PLS3P13797 630 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 FDPSP14324 419 aaKnown RBP11.32□□□□□ -0.6
CCDC148-203ENST00000409889 MATKP42679 507 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 LIG4P49917 911 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 CCDC157Q569K6 752 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 RHBDF2Q6PJF5 856 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 PCSK4Q6UW60 755 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 CD302Q8IX05 232 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 DNM3Q9UQ16 869 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 BTBD3Q9Y2F9 522 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 CABIN1Q9Y6J0 2220 aa11.32□□□□□ -0.6
CCDC148-203ENST00000409889 TP53BP1Q12888 1972 aaPredicted RBP11.32□□□□□ -0.6
CCDC148-203ENST00000409889 NBPF19A0A087WUL8 3843 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 COL5A1P20908 1838 aaPredicted RBP11.31□□□□□ -0.6
CCDC148-203ENST00000409889 KPNA7A9QM74 516 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 RRP8O43159 456 aaKnown RBP11.31□□□□□ -0.6
CCDC148-203ENST00000409889 PFKFB2O60825 505 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 C7P10643 843 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 ACAT1P24752 427 aaKnown RBP11.31□□□□□ -0.6
CCDC148-203ENST00000409889 NTSR1P30989 418 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 PDIA5Q14554 519 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 ZNF174Q15697 407 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 CCDC142Q17RM4 750 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 SV2CQ496J9 727 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 DBX2Q6ZNG2 339 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 GPR155Q7Z3F1 870 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 MIB1Q86YT6 1006 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 SCN4BQ8IWT1 228 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 KIAA1958Q8N8K9 716 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 IPO4Q8TEX9 1081 aaKnown RBP11.31□□□□□ -0.6
CCDC148-203ENST00000409889 TIPINQ9BVW5 301 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 MIR1-1HGQ9H1L0 117 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 SLC6A17Q9H1V8 727 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 CD248Q9HCU0 757 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 PDRG1Q9NUG6 133 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 SMPD4Q9NXE4 827 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 KCNG1Q9UIX4 513 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 DNMT3LQ9UJW3 386 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 CPSF3Q9UKF6 684 aaKnown RBP11.31□□□□□ -0.6
CCDC148-203ENST00000409889 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC148-203ENST00000409889 DERAQ9Y315 318 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 CPQQ9Y646 472 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 MYLKQ15746 1914 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 KNTC1P50748 2209 aa11.31□□□□□ -0.6
CCDC148-203ENST00000409889 KNL1Q8NG31 2342 aa11.3□□□□□ -0.6
CCDC148-203ENST00000409889 PYCARD-AS1I3L0S3 204 aa11.3□□□□□ -0.6
CCDC148-203ENST00000409889 PFKLP17858 780 aa11.3□□□□□ -0.6
CCDC148-203ENST00000409889 GUCY2CP25092 1073 aa11.3□□□□□ -0.6
CCDC148-203ENST00000409889 SLC7A9P82251 487 aa11.3□□□□□ -0.6
CCDC148-203ENST00000409889 BNC1Q01954 994 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms