RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 FAM183BPQ6ZVS7 135 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 XYLT1Q86Y38 959 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 NUP85Q9BW27 656 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 LRRC4Q9HBW1 653 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 KRT86O43790 486 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 ATF2P15336 505 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 RBM10P98175 930 aaKnown RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 EMC1Q8N766 993 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 IPO4Q8TEX9 1081 aaKnown RBP13.26□□□□□ -0.29
PMS1-204ENST00000409823 SLC4A5Q9BY07 1137 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 CSNK1G1Q9HCP0 422 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 LZTS1Q9Y250 596 aa13.26□□□□□ -0.29
PMS1-204ENST00000409823 HHLA1C9JL84 531 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 PRRG1O14668 218 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 ABLIM3O94929 683 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 SLC5A3P53794 718 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 MAMLD1Q13495 774 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 FAM102AQ5T9C2 384 aaPredicted RBP13.25□□□□□ -0.29
PMS1-204ENST00000409823 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 TMEM110Q86TL2 294 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 FUBP3Q96I24 572 aaKnown RBP eCLIP13.25□□□□□ -0.29
PMS1-204ENST00000409823 MCEEQ96PE7 176 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 KLHL5Q96PQ7 755 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 MAGED2Q9UNF1 606 aaPredicted RBP13.25□□□□□ -0.29
PMS1-204ENST00000409823 HYOU1Q9Y4L1 999 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 CAPN6Q9Y6Q1 641 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 TMEM110-MUSTN1A8MSY1 372 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 CALB1P05937 261 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 ATF6P18850 670 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 USP46P62068 366 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 RAB33AQ14088 237 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 ADGRD2Q7Z7M1 963 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 SPPL2BQ8TCT7 592 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 ULBP1Q9BZM6 244 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 METTL5Q9NRN9 209 aaKnown RBP13.25□□□□□ -0.29
PMS1-204ENST00000409823 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.25□□□□□ -0.29
PMS1-204ENST00000409823 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
PMS1-204ENST00000409823 LIN9Q5TKA1 542 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 FAM161BQ96MY7 647 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 EMILIN2Q9BXX0 1053 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 OXCT2Q9BYC2 517 aaPredicted RBP13.24□□□□□ -0.29
PMS1-204ENST00000409823 RXFP1Q9HBX9 757 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 AFF4Q9UHB7 1163 aaKnown RBP13.24□□□□□ -0.29
PMS1-204ENST00000409823 PJA2O43164 708 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 ADH1AP07327 375 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 HAPLN1P10915 354 aaPredicted RBP13.24□□□□□ -0.29
PMS1-204ENST00000409823 ELF1P32519 619 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 PGFP49763 221 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 VSTM1Q6UX27 236 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 CPNE8Q86YQ8 564 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 JOSD2Q8TAC2 188 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 SLC7A14Q8TBB6 771 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 ZNF564Q8TBZ8 553 aaPredicted RBP13.24□□□□□ -0.29
PMS1-204ENST00000409823 RFFLQ8WZ73 363 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 FAM149B1Q96BN6 582 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 HSFY1Q96LI6 401 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 NGRNQ9NPE2 291 aaKnown RBP13.24□□□□□ -0.29
PMS1-204ENST00000409823 FNIP2Q9P278 1114 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 STK39Q9UEW8 545 aa13.24□□□□□ -0.29
PMS1-204ENST00000409823 LPXNO60711 386 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 CYP1A2P05177 515 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 KRT3P12035 628 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
PMS1-204ENST00000409823 GTF2F1P35269 517 aaKnown RBP eCLIP13.23□□□□□ -0.29
PMS1-204ENST00000409823 GABRB2P47870 512 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 UBE3AQ05086 875 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 DCUN1D2Q6PH85 259 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 OLFML1Q6UWY5 402 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 HFE2Q6ZVN8 426 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 MSANTD4Q8NCY6 345 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 STK32AQ8WU08 396 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 VCPIP1Q96JH7 1222 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 SAMD11Q96NU1 681 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 SELENOOQ9BVL4 669 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 PARVAQ9NVD7 372 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 ANAPC7Q9UJX3 599 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 YJEFN3A6XGL0 299 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 E7ENQ6 273 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
PMS1-204ENST00000409823 TWF1Q12792 350 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 ZNF569Q5MCW4 686 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 ZNF697Q5TEC3 545 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 SMYD5Q6GMV2 418 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 TSGA10Q9BZW7 698 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 ZNF576Q9H609 170 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 STRIP2Q9ULQ0 834 aa13.23□□□□□ -0.29
PMS1-204ENST00000409823 TRIM66O15016 1216 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 MYBL1P10243 752 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 EPCAMP16422 314 aa13.22□□□□□ -0.29
PMS1-204ENST00000409823 DNA2P51530 1060 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms