RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 HSF2Q03933 536 aa13.33□□□□□ -0.28
COL6A3-206ENST00000409809 INO80DQ53TQ3 878 aaPredicted RBP13.33□□□□□ -0.28
COL6A3-206ENST00000409809 C16orf62Q7Z3J2 963 aa13.33□□□□□ -0.28
COL6A3-206ENST00000409809 GCNAQ96QF7 691 aa13.33□□□□□ -0.28
COL6A3-206ENST00000409809 CCDC154A6NI56 674 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 EXTL3O43909 919 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 KLHL18O94889 574 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 GYPCP04921 128 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 RPS6KA3P51812 740 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 THNSL1Q8IYQ7 743 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 GALNT8Q9NY28 637 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 MED14O60244 1454 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 PCNAP12004 261 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 STAT3P40763 770 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 PRKAA1Q13131 559 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 DHDDSQ86SQ9 333 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 MAPKAPK5Q8IW41 473 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 SPATA18Q8TC71 538 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 GIPC3Q8TF64 312 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 DCAF4Q8WV16 495 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 CENPIQ92674 756 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-206ENST00000409809 ALADP13716 330 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 COILP38432 576 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-206ENST00000409809 LRRC41Q15345 812 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 CYP51A1Q16850 503 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 LRMDAQ9H2I8 198 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 EPB41L4AQ9HCS5 686 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-206ENST00000409809 TRIM17Q9Y577 477 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 IQGAP3Q86VI3 1631 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 MYL12BO14950 172 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 ADSSP30520 456 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 ALDH5A1P51649 535 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-206ENST00000409809 DEFB107AQ8IZN7 70 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 TEX46H3BTG2 121 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 PDE8BO95263 885 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 AENQ8WTP8 325 aaKnown RBP13.32□□□□□ -0.28
COL6A3-206ENST00000409809 SUGCTQ9HAC7 445 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 ANKARQ7Z5J8 1434 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 PLK4O00444 970 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 STX4Q12846 297 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 SLFN13Q68D06 897 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 EIF3MQ7L2H7 374 aaKnown RBP13.32□□□□□ -0.28
COL6A3-206ENST00000409809 MREGQ8N565 214 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 INTS2Q9H0H0 1204 aaKnown RBP13.32□□□□□ -0.28
COL6A3-206ENST00000409809 ITM2BQ9Y287 266 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 MDM4O15151 490 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 CLDN3O15551 220 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 C21orf2O43822 256 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 PSMB9P28065 219 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 AP3S2P59780 193 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 GRIP2Q9C0E4 1043 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 GGT7Q9UJ14 662 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 RAB26Q9ULW5 256 aa13.32□□□□□ -0.28
COL6A3-206ENST00000409809 NEMP1O14524 444 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 PCSK2P16519 638 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 RAD51Q06609 339 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 ZNF57Q68EA5 555 aaPredicted RBP13.31□□□□□ -0.28
COL6A3-206ENST00000409809 FBXO42Q6P3S6 717 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 ARMC7Q9H6L4 198 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 UTYO14607 1347 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 RASA1P20936 1047 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 PRIM2P49643 509 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 TRAF2Q12933 501 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 IRAK3Q9Y616 596 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 INO80B-WBP1J3KQ70 363 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 ZNF185O15231 689 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 SSNA1O43805 119 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 APOL3O95236 402 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 FAM160B2Q86V87 743 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 THEM5Q8N1Q8 247 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 C1orf131Q8NDD1 294 aaKnown RBP13.31□□□□□ -0.28
COL6A3-206ENST00000409809 TPCN2Q8NHX9 752 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 KLHL32Q96NJ5 620 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 MED15Q96RN5 788 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 INO80BQ9C086 356 aaPredicted RBP13.31□□□□□ -0.28
COL6A3-206ENST00000409809 CDC42BPGQ6DT37 1551 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 TEX28O15482 410 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 DDHD2O94830 711 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 RAG1P15918 1043 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 FAUP35544 74 aaKnown RBP13.31□□□□□ -0.28
COL6A3-206ENST00000409809 PHKA1P46020 1223 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 MYL6P60660 151 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 MCL1Q07820 350 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 CASP12Q6UXS9 341 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 POLNQ7Z5Q5 900 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 EHD3Q9NZN3 535 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 MAGEB16A2A368 324 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 MUTP22033 750 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 TMEM26Q6ZUK4 368 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 TAF8Q7Z7C8 310 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 RAB6BQ9NRW1 208 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 MKLN1Q9UL63 735 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 RECQL5O94762 991 aaPredicted RBP13.31□□□□□ -0.28
COL6A3-206ENST00000409809 HSMCR30P0CW71 290 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 CYP2D6P10635 497 aa13.31□□□□□ -0.28
COL6A3-206ENST00000409809 AKT1P31749 480 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms