RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 SLITRK1Q96PX8 696 aa14.8□□□□□ -0.04
LIMS2-206ENST00000409754 HNRNPABQ99729 332 aaKnown RBP14.8□□□□□ -0.04
LIMS2-206ENST00000409754 LPIN3Q9BQK8 851 aa14.8□□□□□ -0.04
LIMS2-206ENST00000409754 ERP44Q9BS26 406 aa14.8□□□□□ -0.04
LIMS2-206ENST00000409754 HERPUD2Q9BSE4 406 aa14.8□□□□□ -0.04
LIMS2-206ENST00000409754 ASNSD1Q9NWL6 643 aa14.8□□□□□ -0.04
LIMS2-206ENST00000409754 HPCAL4Q9UM19 191 aa14.8□□□□□ -0.04
LIMS2-206ENST00000409754 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-206ENST00000409754 C2CD4BA6NLJ0 364 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 DPYSL4O14531 572 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 ADORA2BP29275 332 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 ECHS1P30084 290 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 PCK1P35558 622 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 SCNN1AP37088 669 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 ACADSBP45954 432 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 LHX1P48742 406 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 SLC6A3Q01959 620 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 ATP13A4Q4VNC1 1196 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 FAM109BQ6ICB4 259 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-206ENST00000409754 RTN4RL1Q86UN2 441 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-206ENST00000409754 CCDC105Q8IYK2 499 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 SPATA18Q8TC71 538 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 SLC2A14Q8TDB8 520 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 RNF25Q96BH1 459 aaPredicted RBP14.79□□□□□ -0.04
LIMS2-206ENST00000409754 HSFY1Q96LI6 401 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 GDAP1L1Q96MZ0 367 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 UROC1Q96N76 676 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 TRIM51Q9BSJ1 452 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 CNPY3Q9BT09 278 aa14.79□□□□□ -0.04
LIMS2-206ENST00000409754 UBE2OQ9C0C9 1292 aaKnown RBP14.79□□□□□ -0.04
LIMS2-206ENST00000409754 CASTOR2A6NHX0 329 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 C9IYK1 514 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 DAPK3O43293 454 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 RNF8O76064 485 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 EOMESO95936 686 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 PTPN1P18031 435 aaKnown RBP14.78□□□□□ -0.04
LIMS2-206ENST00000409754 TUSC3Q13454 348 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 HLTFQ14527 1009 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIMS2-206ENST00000409754 ODF2Q5BJF6 829 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 TXNRD3NBQ6F5E7 133 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 MFSD7Q6UXD7 560 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 DSTYKQ6XUX3 929 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 SPOCD1Q6ZMY3 1216 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 OTOP2Q7RTS6 562 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 ANKS1BQ7Z6G8 1248 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 DDX42Q86XP3 938 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIMS2-206ENST00000409754 MREGQ8N565 214 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 C3orf58Q8NDZ4 430 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 RXFP2Q8WXD0 754 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 DCLK3Q9C098 648 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 CACNG4Q9UBN1 327 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 TRANK1O15050 2925 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 TTC3P53804 2025 aa14.78□□□□□ -0.04
LIMS2-206ENST00000409754 PIK3R2O00459 728 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 XPO1O14980 1071 aaKnown RBP14.77□□□□□ -0.04
LIMS2-206ENST00000409754 PAPSS1O43252 624 aaPredicted RBP14.77□□□□□ -0.04
LIMS2-206ENST00000409754 GABBR2O75899 941 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 ECEL1O95672 775 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 POMCP01189 267 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 FAM153BP0C7A2 387 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 PDGFRAP16234 1089 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 IGFBP6P24592 240 aaPredicted RBP14.77□□□□□ -0.04
LIMS2-206ENST00000409754 GBP1P32455 592 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 FAM189BP81408 668 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 DEFB103AP81534 67 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 LLGL1Q15334 1064 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 CCNG2Q16589 344 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 FAM153CQ494X1 144 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 ZFYVE27Q5T4F4 411 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 SLC24A5Q71RS6 500 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 ARCQ7LC44 396 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 TMCO2Q7Z6W1 182 aaPredicted RBP14.77□□□□□ -0.04
LIMS2-206ENST00000409754 C1orf54Q8WWF1 131 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 HERVK_113Q902F9 699 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 RAPGEF5Q92565 580 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 PIWIL1Q96J94 861 aaKnown RBP14.77□□□□□ -0.04
LIMS2-206ENST00000409754 HEMGNQ9BXL5 484 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 DUSP16Q9BY84 665 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 CHST7Q9NS84 486 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 KLHL11Q9NVR0 708 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 DDX43Q9NXZ2 648 aaKnown RBP14.77□□□□□ -0.04
LIMS2-206ENST00000409754 FAM153AQ9UHL3 310 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 FEZ2Q9UHY8 353 aaPredicted RBP14.77□□□□□ -0.04
LIMS2-206ENST00000409754 EFR3BQ9Y2G0 817 aa14.77□□□□□ -0.04
LIMS2-206ENST00000409754 PI4K2BG5E9Z4 385 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 TJP3O95049 919 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 PARNO95453 639 aaKnown RBP14.77□□□□□ -0.05
LIMS2-206ENST00000409754 ACAT1P24752 427 aaKnown RBP14.77□□□□□ -0.05
LIMS2-206ENST00000409754 IL1R2P27930 398 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 TKTP29401 623 aaKnown RBP14.77□□□□□ -0.05
LIMS2-206ENST00000409754 MIPP30301 263 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 FLT3P36888 993 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 SLC8A3P57103 927 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 CBX1P83916 185 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 PLCB3Q01970 1234 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 TFDP3Q5H9I0 405 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 TRNP1Q6NT89 227 aa14.77□□□□□ -0.05
LIMS2-206ENST00000409754 PSRC1Q6PGN9 363 aaPredicted RBP14.77□□□□□ -0.05
LIMS2-206ENST00000409754 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms