RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 HMGXB4Q9UGU5 601 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 PCDHGA2Q9Y5H1 932 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 FAM186AA6NE01 2351 aa20.82■□□□□ 0.92
TSPAN4-209ENST00000409543 TNFRSF10BO14763 440 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 AP1G2O75843 785 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 TRIM21P19474 475 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 SLC7A9P82251 487 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 FKBP3Q00688 224 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 AMPD2Q01433 879 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 ORC1Q13415 861 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 CCINQ13939 588 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 GAS6Q14393 721 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 PPP2R5DQ14738 602 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 ANKRD40Q6AI12 368 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 TSSK4Q6SA08 328 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 ZC3H3Q8IXZ2 948 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 ADSSL1Q8N142 457 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 SYNPOQ8N3V7 929 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 SPEM1Q8N4L4 309 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 ZBTB44Q8NCP5 570 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 PDZD8Q8NEN9 1154 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 OVCA2Q8WZ82 227 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 FAXDC2Q96IV6 333 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 NIF3L1Q9GZT8 377 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 RBM12Q9NTZ6 932 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 COMMD8Q9NX08 183 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 ZSCAN32Q9NX65 697 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 DUS2Q9NX74 493 aaKnown RBP20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 IL37Q9NZH6 218 aa20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 CIZ1Q9ULV3 898 aaPredicted RBP20.81■□□□□ 0.92
TSPAN4-209ENST00000409543 SLC16A3O15427 465 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 KINO60870 393 aaKnown RBP20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 OLFM2O95897 454 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 ABL1P00519 1130 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 TDGF1P13385 188 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 CCDC130P13994 396 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 CXCL12P48061 93 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 IFNAR2P48551 515 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 LRRC63Q05C16 580 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 CPA6Q8N4T0 437 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 KIAA1958Q8N8K9 716 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 C12orf29Q8N999 325 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 SLC2A14Q8TDB8 520 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 ATRIPQ8WXE1 791 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 ATP2A3Q93084 1043 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 RNF38Q9H0F5 515 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 CSNK1G1Q9HCP0 422 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 KRT82Q9NSB4 513 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 WNT6Q9Y6F9 365 aa20.8■□□□□ 0.92
TSPAN4-209ENST00000409543 HELZP42694 1942 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 WDR87Q6ZQQ6 2873 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 TRDMT1O14717 391 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 OAS1P00973 400 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 MXI1P50539 228 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 SLC5A3P53794 718 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 PMS1P54277 932 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 NRLP54845 237 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 ZXDBP98169 803 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 IFRD2Q12894 506 aaPredicted RBP20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 STIM1Q13586 685 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 EML3Q32P44 896 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 FBXL13Q8NEE6 735 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 TTC16Q8NEE8 873 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 ZMIZ2Q8NF64 920 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 SCAMP5Q8TAC9 235 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 SEMA4DQ92854 862 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 FBXO32Q969P5 355 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 CHFRQ96EP1 664 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 SMOQ99835 787 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 NT5C1AQ9BXI3 368 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 DNAI2Q9GZS0 605 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 ECT2Q9H8V3 914 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 FAM49BQ9NUQ9 324 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 RAB20Q9NX57 234 aa20.79■□□□□ 0.92
TSPAN4-209ENST00000409543 FAM92AA1XBS5 289 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 LEFTY2O00292 366 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 PSMA7O14818 248 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 LILRB5O75023 590 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 CILPO75339 1184 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 PPP1R2P41236 205 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 GRSF1Q12849 480 aaKnown RBP eCLIP20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 TMEM196Q5HYL7 178 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 SNX30Q5VWJ9 437 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 Q6ZS52 159 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 WHAMMQ8TF30 809 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 DHTKD1Q96HY7 919 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 TWNKQ96RR1 684 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 HNRNPABQ99729 332 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 MAN1B1Q9UKM7 699 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 DMDP11532 3685 aa20.78■□□□□ 0.92
TSPAN4-209ENST00000409543 GADD45BO75293 160 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 BEST1O76090 585 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 PAPSS2O95340 614 aaPredicted RBP20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 FAM200BP0CF97 657 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 CD58P19256 250 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 GJA4P35212 333 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 MAP3K7CLP57077 242 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 SATB1Q01826 763 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 FSTL4Q6MZW2 842 aa20.77■□□□□ 0.92
TSPAN4-209ENST00000409543 TTC39CQ8N584 583 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms