RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 CCL26Q9Y258 94 aa20.2■□□□□ 0.82
PPM1B-207ENST00000409486 ANAPC1Q9H1A4 1944 aa20.2■□□□□ 0.82
PPM1B-207ENST00000409486 PATJQ8NI35 1801 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 TRAV19A0A0A6YYK7 116 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 PIK3R2O00459 728 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 RTN3O95197 1032 aaPredicted RBP20.19■□□□□ 0.82
PPM1B-207ENST00000409486 MFAP3P55082 362 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 RAPGEF1Q13905 1077 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 CDKAL1Q5VV42 579 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 HFE2Q6ZVN8 426 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 CMTM8Q8IZV2 173 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 UBR7Q8N806 425 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 ANKRD20A12PQ8NF67 263 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 MYRFLQ96LU7 910 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 TRMT61BQ9BVS5 477 aaKnown RBP20.19■□□□□ 0.82
PPM1B-207ENST00000409486 DUSP16Q9BY84 665 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 SMPD4Q9NXE4 827 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 EHD2Q9NZN4 543 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 HESX1Q9UBX0 185 aa20.19■□□□□ 0.82
PPM1B-207ENST00000409486 FAM170AA1A519 330 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 SCAMP3O14828 347 aaKnown RBP20.18■□□□□ 0.82
PPM1B-207ENST00000409486 CYP26A1O43174 497 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 PNMA6AP0CW24 399 aaPredicted RBP20.18■□□□□ 0.82
PPM1B-207ENST00000409486 KLK7P49862 253 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 GCNT1Q02742 428 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 IER5LQ5T953 404 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 TFAP2BQ92481 460 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 LRFN3Q9BTN0 628 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 ACP6Q9NPH0 428 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 APEX2Q9UBZ4 518 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 TICRRQ7Z2Z1 1910 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 M0QYV0 167 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 TULP2O00295 520 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 VDRP11473 427 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 SLC8A3P57103 927 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 MON1AQ86VX9 555 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 TTC30AQ86WT1 665 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 ASIC4Q96FT7 647 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 NACA2Q9H009 215 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 DNAJC12Q9UKB3 198 aa20.18■□□□□ 0.82
PPM1B-207ENST00000409486 TECTAO75443 2155 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 BECN2A8MW95 431 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 TNFRSF10BO14763 440 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 ZNF263O14978 683 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 LETM1O95202 739 aaPredicted RBP20.17■□□□□ 0.82
PPM1B-207ENST00000409486 ATP1A3P13637 1013 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 PSMC3P17980 439 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 HDCP19113 662 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 DDX6P26196 483 aaKnown RBP eCLIP20.17■□□□□ 0.82
PPM1B-207ENST00000409486 RGS7P49802 495 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 ZNF165P49910 485 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 COPB1P53618 953 aaKnown RBP20.17■□□□□ 0.82
PPM1B-207ENST00000409486 PDE4CQ08493 712 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 ZSCAN23Q3MJ62 389 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 ARHGAP17Q68EM7 881 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 USP13Q92995 863 aaPredicted RBP20.17■□□□□ 0.82
PPM1B-207ENST00000409486 LRRC3BQ96PB8 259 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 TTLL2Q9BWV7 592 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 CSNK1G1Q9HCP0 422 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 SIX2Q9NPC8 291 aa20.17■□□□□ 0.82
PPM1B-207ENST00000409486 ZNF840PA6NDX5 716 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 HHLA1C9JL84 531 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 THAP12O43422 761 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 USP17L7P0C7H9 530 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 MBL2P11226 248 aaPredicted RBP20.16■□□□□ 0.82
PPM1B-207ENST00000409486 PGFP49763 221 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 NCAPHQ15003 741 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 DHX40Q8IX18 779 aaKnown RBP20.16■□□□□ 0.82
PPM1B-207ENST00000409486 CCSER2Q9H7U1 834 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 HEBP1Q9NRV9 189 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 TDP1Q9NUW8 608 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 NUDT5Q9UKK9 219 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 FHOD1Q9Y613 1164 aa20.16■□□□□ 0.82
PPM1B-207ENST00000409486 GTPBP10A4D1E9 387 aaKnown RBP20.15■□□□□ 0.82
PPM1B-207ENST00000409486 KRBA1A5PL33 1030 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 O00370 1275 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 PAEPP09466 180 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 IRF1P10914 325 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 LCP1P13796 627 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 BCAT1P54687 386 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 KCNMA1Q12791 1236 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 SKOR2Q2VWA4 1001 aaPredicted RBP20.15■□□□□ 0.82
PPM1B-207ENST00000409486 PIGZQ86VD9 579 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 MFSD6LQ8IWD5 586 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 CELF5Q8N6W0 485 aaKnown RBP20.15■□□□□ 0.82
PPM1B-207ENST00000409486 ANKRD52Q8NB46 1076 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 BPIFB1Q8TDL5 484 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 NDRG1Q92597 394 aaKnown RBP20.15■□□□□ 0.82
PPM1B-207ENST00000409486 SECISBP2LQ93073 1101 aaKnown RBP20.15■□□□□ 0.82
PPM1B-207ENST00000409486 CEP295NLQ96MC4 621 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 ZSWIM1Q9BR11 485 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 FBXO44Q9H4M3 255 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 ARHGEF3Q9NR81 526 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 FAM207AQ9NSI2 230 aaPredicted RBP20.15■□□□□ 0.82
PPM1B-207ENST00000409486 HELZP42694 1942 aaKnown RBP20.15■□□□□ 0.82
PPM1B-207ENST00000409486 TRIOO75962 3097 aa20.15■□□□□ 0.82
PPM1B-207ENST00000409486 A0A1W2PQH9 124 aa20.14■□□□□ 0.81
PPM1B-207ENST00000409486 SMTNL1A8MU46 457 aa20.14■□□□□ 0.81
PPM1B-207ENST00000409486 GPR37L1O60883 481 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms