RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 FNDC3AQ9Y2H6 1198 aaKnown RBP18.29■□□□□ 0.52
SMPD4-202ENST00000409031 SLIT1O75093 1534 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 SETD1BQ9UPS6 1966 aaKnown RBP18.29■□□□□ 0.52
SMPD4-202ENST00000409031 SPDYE2BA6NHP3 402 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 SDR42E2A6NKP2 422 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 SPDYE6P0CI01 402 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 PDK1Q15118 436 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 ANGPTL8Q6UXH0 198 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 ZNF572Q7Z3I7 529 aaPredicted RBP18.29■□□□□ 0.52
SMPD4-202ENST00000409031 ACSF2Q96CM8 615 aaPredicted RBP18.29■□□□□ 0.52
SMPD4-202ENST00000409031 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 COQ7Q99807 217 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 NCANO14594 1321 aa18.29■□□□□ 0.52
SMPD4-202ENST00000409031 BMPR2Q13873 1038 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 TMEM119Q4V9L6 283 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 FAXCQ5TGI0 409 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 PPP1R14BQ96C90 147 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 AVENQ9NQS1 362 aaPredicted RBP18.28■□□□□ 0.52
SMPD4-202ENST00000409031 ZNF263O14978 683 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 PRKG1Q13976 671 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 COBLL1Q53SF7 1204 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 TBCELQ5QJ74 424 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 TMEM63BQ5T3F8 832 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 RSBN1Q5VWQ0 802 aaPredicted RBP18.28■□□□□ 0.52
SMPD4-202ENST00000409031 OTOAQ7RTW8 1153 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 ZNF720Q7Z2F6 126 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 CLNKQ7Z7G1 428 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 ULK2Q8IYT8 1036 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 ZCWPW1Q9H0M4 648 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 GANQ9H2C0 597 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 CIDEBQ9UHD4 219 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 RPS6KL1Q9Y6S9 549 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 GPD1P21695 349 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 ITGADQ13349 1161 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 CUL2Q13617 745 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 MCOLN2Q8IZK6 566 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 USP13Q92995 863 aaPredicted RBP18.28■□□□□ 0.52
SMPD4-202ENST00000409031 DENND2DQ9H6A0 471 aaPredicted RBP18.28■□□□□ 0.52
SMPD4-202ENST00000409031 NFKBIAP25963 317 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 MRPS22P82650 360 aaKnown RBP18.28■□□□□ 0.52
SMPD4-202ENST00000409031 CHRNB3Q05901 458 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 ZNF618Q5T7W0 954 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 EFL1Q7Z2Z2 1120 aaKnown RBP18.28■□□□□ 0.52
SMPD4-202ENST00000409031 TRABD2AQ86V40 505 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 HEATR4Q86WZ0 1026 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 RNF139Q8WU17 664 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 CCDC126Q96EE4 140 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 ARHGEF38Q9NXL2 777 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 SLAIN2Q9P270 581 aa18.28■□□□□ 0.52
SMPD4-202ENST00000409031 HBS1LQ9Y450 684 aaKnown RBP18.28■□□□□ 0.52
SMPD4-202ENST00000409031 DCXO43602 365 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 EIF2S1P05198 315 aaKnown RBP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 ASNSP08243 561 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 FAAP100Q0VG06 881 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 TRAF2Q12933 501 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 PPP1R15BQ5SWA1 713 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 KYAT3Q6YP21 454 aaKnown RBP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 TDRD5Q8NAT2 981 aaKnown RBP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 ZNF280CQ8ND82 737 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 FNIP1Q8TF40 1166 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 ELMO2Q96JJ3 720 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 NIF3L1Q9GZT8 377 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 EXOSC4Q9NPD3 245 aaKnown RBP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 ZC3H13Q5T200 1668 aaKnown RBP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 DEPDC5O75140 1603 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 CLRN2A0PK11 232 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 DCDC2CA8MYV0 355 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 FOLH1Q04609 750 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 PIWIL2Q8TC59 973 aaKnown RBP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 GPAMQ9HCL2 828 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 SLC5A4Q9NY91 659 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 FAM237BA0A1B0GVD1 139 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 EXTL3O43909 919 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 CCDC166P0CW27 439 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 TPBGLP0DKB5 382 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 GPR101Q96P66 508 aaPredicted RBP18.27■□□□□ 0.52
SMPD4-202ENST00000409031 BBS2Q9BXC9 721 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 ZNF518BQ9C0D4 1074 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 EURLQ9NYK6 297 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 FAM8A1Q9UBU6 413 aa18.27■□□□□ 0.52
SMPD4-202ENST00000409031 LRRIQ1Q96JM4 1722 aa18.27■□□□□ 0.51
SMPD4-202ENST00000409031 S100A1P23297 94 aa18.27■□□□□ 0.51
SMPD4-202ENST00000409031 TSPY1Q01534 308 aa18.27■□□□□ 0.51
SMPD4-202ENST00000409031 NEDD8Q15843 81 aa18.27■□□□□ 0.51
SMPD4-202ENST00000409031 C2CD6Q53TS8 623 aa18.27■□□□□ 0.51
SMPD4-202ENST00000409031 RBM46Q8TBY0 533 aaKnown RBP18.27■□□□□ 0.51
SMPD4-202ENST00000409031 CDH3P22223 829 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 SLC25A3Q00325 362 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 KCNA1Q09470 495 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 FAM83EQ2M2I3 478 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
SMPD4-202ENST00000409031 TRIM69Q86WT6 500 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 METTL23Q86XA0 190 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 TMC2Q8TDI7 906 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 NAT14Q8WUY8 206 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 ZMYM2Q9UBW7 1377 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 TCRBV5S4A2TA0A5A2 114 aa18.26■□□□□ 0.51
SMPD4-202ENST00000409031 DYTNA2CJ06 578 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms