RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 DPEP3Q9H4B8 488 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 EBF3Q9H4W6 596 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 ECT2Q9H8V3 914 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 GDPD2Q9HCC8 539 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 KRT82Q9NSB4 513 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 GCNT4Q9P109 453 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 TBC1D14Q9P2M4 693 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 GMEB2Q9UKD1 530 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 CCL26Q9Y258 94 aa9.64□□□□□ -0.87
SNORD88A-201ENST00000408314 GVINP1Q7Z2Y8 2422 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 SHISA7A6NL88 538 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 FOXD2O60548 495 aaPredicted RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 AP1G2O75843 785 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 VNN1O95497 513 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 OLFM2O95897 454 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 ABL1P00519 1130 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 FAM200BP0CF97 657 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 MBL2P11226 248 aaPredicted RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 HOXA6P31267 233 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 ASPAP45381 313 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 RAP1GAPP47736 663 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 NDST1P52848 882 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 SLC8A3P57103 927 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 DLG4P78352 724 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 FKBP3Q00688 224 aaKnown RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 INCA1Q0VD86 236 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 PREPLQ4J6C6 727 aaPredicted RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 ZCWPW2Q504Y3 356 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 TMEM196Q5HYL7 178 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 HECTD3Q5T447 861 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 SCARA3Q6AZY7 606 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 TXNDC11Q6PKC3 985 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 TADA2BQ86TJ2 420 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 ACOT1Q86TX2 421 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 GPIHBP1Q8IV16 184 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 ARL14EPQ8N8R7 260 aaPredicted RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 FBXL13Q8NEE6 735 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 OTUB2Q96DC9 234 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 P2RY13Q9BPV8 354 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 METTL14Q9HCE5 456 aaKnown RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 PNPLA8Q9NP80 782 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 HPS4Q9NQG7 708 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 CIZ1Q9ULV3 898 aaPredicted RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 SMG5Q9UPR3 1016 aaKnown RBP9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 MAPK8IP1Q9UQF2 711 aa9.63□□□□□ -0.87
SNORD88A-201ENST00000408314 HELZP42694 1942 aaKnown RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 GREB1Q4ZG55 1949 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 COL4A3Q01955 1670 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CCDC163A0A0D9SF12 145 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 BICDL2A1A5D9 508 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 C2orf78A6NCI8 922 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 LEFTY2O00292 366 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 ADH1CP00326 375 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 OAS1P00973 400 aaKnown RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 TRIM49P0CI25 452 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 TRIM49CP0CI26 452 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 SDHBP21912 280 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 GJA4P35212 333 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 GCLMP48507 274 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 PSEN1P49768 467 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 SLC5A3P53794 718 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CDH8P55286 799 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 USP46P62068 366 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 FOXK2Q01167 660 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 SATB1Q01826 763 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CETN1Q12798 172 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 IFRD2Q12894 506 aaPredicted RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 PNOCQ13519 176 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 EML3Q32P44 896 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 TCERG1LQ5VWI1 586 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 LAIR1Q6GTX8 287 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 LONP2Q86WA8 852 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 FUKQ8N0W3 1084 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 SUMF1Q8NBK3 374 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 SLC2A14Q8TDB8 520 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 TAS1R2Q8TE23 839 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CD101Q93033 1021 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CHAMP1Q96JM3 812 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CYP2S1Q96SQ9 504 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CDK5RAP1Q96SZ6 601 aaKnown RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 HNRNPABQ99729 332 aaKnown RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 DUSP9Q99956 384 aaKnown RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 MMRN2Q9H8L6 949 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 TLR8Q9NR97 1041 aaKnown RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 ARMCX3Q9UH62 379 aaPredicted RBP9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 SLC8A2Q9UPR5 921 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 SH3BP1Q9Y3L3 701 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 PCDHA5Q9Y5H7 936 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 CPQQ9Y646 472 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 WNT6Q9Y6F9 365 aa9.62□□□□□ -0.87
SNORD88A-201ENST00000408314 E2F8A0AVK6 867 aa9.61□□□□□ -0.87
SNORD88A-201ENST00000408314 FAM92AA1XBS5 289 aa9.61□□□□□ -0.87
SNORD88A-201ENST00000408314 CHURC1-FNTBB4DL54 471 aa9.61□□□□□ -0.87
SNORD88A-201ENST00000408314 CLDN5O00501 218 aa9.61□□□□□ -0.87
SNORD88A-201ENST00000408314 LRP3O75074 770 aa9.61□□□□□ -0.87
SNORD88A-201ENST00000408314 TDGF1P13385 188 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms