RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 VDRP11473 427 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 NQO1P15559 274 aaKnown RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 FOXN2P32314 431 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 FNBP1LQ5T0N5 605 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 XYLT1Q86Y38 959 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 ZNF513Q8N8E2 541 aaPredicted RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 SLC4A11Q8NBS3 891 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 CCDC110Q8TBZ0 833 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 PIH1D1Q9NWS0 290 aaKnown RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 SNTG2Q9NY99 539 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 SENP1Q9P0U3 644 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 ZFP69BQ9UJL9 534 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 TNFSF13BQ9Y275 285 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 DOCK5Q9H7D0 1870 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 CFAP73A6NFT4 308 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 KBTBD13C9JR72 458 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 H3BRB1 525 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 COPEO14579 308 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 ITGAVP06756 1048 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 ZC3H12AQ5D1E8 599 aaKnown RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 RNASEH2BQ5TBB1 312 aaKnown RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 FAM183BPQ6ZVS7 135 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 FASTKD5Q7L8L6 764 aaKnown RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 MCUR1Q96AQ8 359 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 RILPQ96NA2 401 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 CNPY3Q9BT09 278 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 TUT1Q9H6E5 874 aaKnown RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 SETD4Q9NVD3 440 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 ZC3H7BQ9UGR2 993 aaKnown RBP12.42□□□□□ -0.42
PCNX4-204ENST00000406949 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
PCNX4-204ENST00000406949 TCRBV7S3A2A0A539 114 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 CFAP69A5D8W1 941 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 B4GALT4O60513 344 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 TAC1P20366 129 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 WDR4P57081 412 aaKnown RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 SLC8A3P57103 927 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 MBTD1Q05BQ5 628 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 RCN2Q14257 317 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 SLC1A5Q15758 541 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 LGSNQ5TDP6 509 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 TRIM68Q6AZZ1 485 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 BBS12Q6ZW61 710 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 SUGP1Q8IWZ8 645 aaKnown RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 RNF217Q8TC41 542 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 TCP10LQ8TDR4 215 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 CPT1BQ92523 772 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 N4BP2L2Q92802 583 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 RSRC1Q96IZ7 334 aaKnown RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 RAB3IPQ96QF0 476 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 NCAPGQ9BPX3 1015 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 MARCOQ9UEW3 520 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 DYNC1LI2O43237 492 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 CREB3O43889 395 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 HMGCRP04035 888 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 AKAP5P24588 427 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 ZNF268Q14587 947 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 PLPPR4Q7Z2D5 763 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 APBB1IPQ7Z5R6 666 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 FITM2Q8N6M3 262 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 OR6J1Q8NGC5 347 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 GRAMD1AQ96CP6 724 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 CDCA5Q96FF9 252 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 OSMRQ99650 979 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 FERMT1Q9BQL6 677 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 XYLT2Q9H1B5 865 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 SIX4Q9UIU6 781 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 BARX2Q9UMQ3 279 aaPredicted RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 USH1CQ9Y6N9 552 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 APOC4-APOC2K7ER74 178 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 CAPN9O14815 690 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 MAGEB2O15479 319 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 ATP6V1G2O95670 118 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 APOC2P02655 101 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 ADORA2AP29274 412 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 ZNF132P52740 706 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 SNX16P57768 344 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 LAMC2Q13753 1193 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 BMPR2Q13873 1038 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 RAB6CQ53S08 254 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 CCDC62Q6P9F0 684 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 CEP41Q9BYV8 373 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 RAB6CQ9H0N0 254 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 RBPJLQ9UBG7 517 aa12.41□□□□□ -0.42
PCNX4-204ENST00000406949 PIN4Q9Y237 131 aaKnown RBP12.41□□□□□ -0.42
PCNX4-204ENST00000406949 A8MUI8 341 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 DCTN3O75935 186 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 DNAJC8O75937 253 aaPredicted RBP12.4□□□□□ -0.42
PCNX4-204ENST00000406949 RBL1P28749 1068 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 TMPRSS15P98073 1019 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 DPYSL3Q14195 570 aa12.4□□□□□ -0.42
PCNX4-204ENST00000406949 MTFR1Q15390 333 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms