RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 CFAP57Q96MR6 1250 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 PEBP4Q96S96 227 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 GAD1Q99259 594 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 CALN1Q9BXU9 219 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 TSPYL2Q9H2G4 693 aaPredicted RBP25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 CYLDQ9NQC7 956 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 A6NNZ2 444 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 MEIS3P2A8K0S8 358 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 THP07101 528 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 CHKAP35790 457 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 ACADSBP45954 432 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 ATP11AP98196 1134 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 SKIDA1Q1XH10 827 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 P3H1Q32P28 736 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 TUBB8Q3ZCM7 444 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 EMC10Q5UCC4 262 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 PRUNE1Q86TP1 453 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 SLC35B2Q8TB61 432 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 NCAPGQ9BPX3 1015 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 MAK16Q9BXY0 300 aaKnown RBP25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 B3GNT5Q9BYG0 378 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 RSAD1Q9HA92 442 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 AAASQ9NRG9 546 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 RNF186Q9NXI6 227 aa25.84■■□□□ 1.73
DNMT3A-206ENST00000406659 ATP1A2P50993 1020 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 ARSEP51690 589 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 OTUD4Q01804 1114 aaKnown RBP25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 SCYL2Q6P3W7 929 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 CROCCP2Q86T23 111 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 PCSK9Q8NBP7 692 aaKnown RBP25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 B3GALNT2Q8NCR0 500 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 ACTL9Q8TC94 416 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 KHSRPQ92945 711 aaKnown RBP eCLIP25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 LPPQ93052 612 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 NGRNQ9NPE2 291 aaKnown RBP25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 GIT1Q9Y2X7 761 aa25.83■■□□□ 1.73
DNMT3A-206ENST00000406659 SGK1O00141 431 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 LCP1P13796 627 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 CST5P28325 142 aaPredicted RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 CDH6P55285 790 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 CAP1Q01518 475 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 RAB6CQ53S08 254 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 WSCD1Q658N2 575 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 RAB6CQ9H0N0 254 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 AGO3Q9H9G7 860 aaKnown RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 NOVA2Q9UNW9 492 aaKnown RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 GNGT1P63211 74 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 BOLA3Q53S33 107 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 CCSAPQ6IQ19 270 aaPredicted RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 ARFGAP2Q8N6H7 521 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 UHMK1Q8TAS1 419 aaKnown RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 FAM172AQ8WUF8 416 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 HSFY1Q96LI6 401 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 TMEM121Q9BTD3 319 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 CDC42EP4Q9H3Q1 356 aaKnown RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 SAE1Q9UBE0 346 aaPredicted RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 CASP8AP2Q9UKL3 1982 aa25.82■■□□□ 1.72
DNMT3A-206ENST00000406659 GRIN2DO15399 1336 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 ARL5CA6NH57 179 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 CAPN15O75808 1086 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 ZSCAN5DPP0CG00 497 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 PTPN1P18031 435 aaKnown RBP25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 CD52P31358 61 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 HPDP32754 393 aaPredicted RBP25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 SCNN1AP37088 669 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 RPL34P49207 117 aaKnown RBP25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 SLC8A3P57103 927 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 GPS1Q13098 491 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 KRT81Q14533 505 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 HIBCHQ6NVY1 386 aaPredicted RBP25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 CEP128Q6ZU80 1094 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 CYP4V2Q6ZWL3 525 aaPredicted RBP25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 MRPL10Q7Z7H8 261 aaKnown RBP25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 MAP7D3Q8IWC1 876 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 GSTCDQ8NEC7 633 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 SENP8Q96LD8 212 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 HNRNPABQ99729 332 aaKnown RBP25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 FOXP3Q9BZS1 431 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 PADI3Q9ULW8 664 aa25.81■■□□□ 1.72
DNMT3A-206ENST00000406659 DNALI1O14645 258 aaPredicted RBP25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 ENDOD1O94919 500 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 ETS1P14921 441 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 IRAK1P51617 712 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 SLC26A9Q7LBE3 791 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 GLIS1Q8NBF1 620 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 TMEM109Q9BVC6 243 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 PCDH9Q9HC56 1237 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 LRRC4CQ9HCJ2 640 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 DNAJC17Q9NVM6 304 aaKnown RBP25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 MIOSQ9NXC5 875 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 NOD1Q9Y239 953 aa25.8■■□□□ 1.72
DNMT3A-206ENST00000406659 TLDC2A0PJX2 215 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 NDC80O14777 642 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 KIF3CO14782 793 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 XPO1O14980 1071 aaKnown RBP25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 CAND2O75155 1236 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 ATP2C2O75185 946 aa25.79■■□□□ 1.72
DNMT3A-206ENST00000406659 GHRP10912 638 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms