RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SPAG5Q96R06 1193 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ARID3AQ99856 593 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 MED10Q9BTT4 135 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 DDX23Q9BUQ8 820 aaKnown RBP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 NUP58Q9BVL2 599 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 STK33Q9BYT3 514 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 TRIM5Q9C035 493 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ELOVL4Q9GZR5 314 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 RBSNQ9H1K0 784 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 LTB4R2Q9NPC1 389 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ABI2Q9NYB9 513 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 FBXW11Q9UKB1 542 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 GTF3C4Q9UKN8 822 aa11.19□□□□□ -0.62
RPAIN-204ENST00000405578 ANKRD11Q6UB99 2663 aaPredicted RBP11.19□□□□□ -0.62
RPAIN-204ENST00000405578 MYBPHLA2RUH7 354 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 MTMR11A4FU01 709 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 FAM170BA6NMN3 283 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 TEX33O43247 280 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 XYLBO75191 536 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 LRG1P02750 347 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 C8AP07357 584 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 TPM1P09493 284 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 HNRNPA1P09651 372 aaKnown RBP eCLIP11.18□□□□□ -0.62
RPAIN-204ENST00000405578 SPATA31D3P0C874 917 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 CD19P15391 556 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 EPHB3P54753 998 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 POLR2FP61218 127 aaKnown RBP11.18□□□□□ -0.62
RPAIN-204ENST00000405578 RPL10AP62906 217 aaKnown RBP11.18□□□□□ -0.62
RPAIN-204ENST00000405578 PRKCQQ04759 706 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 DUSP4Q13115 394 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 VEPH1Q14D04 833 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 STILQ15468 1287 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 MGAT5BQ3V5L5 792 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 CFAP221Q4G0U5 840 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 SGO2Q562F6 1265 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 PPM1LQ5SGD2 360 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 IQCEQ6IPM2 695 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 FAM171BQ6P995 826 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 RNF19BQ6ZMZ0 732 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 SPATA31D4Q6ZUB0 917 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 ATAD1Q8NBU5 361 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 RBBP8NLQ8NC74 664 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-204ENST00000405578 ZNF397Q8NF99 534 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-204ENST00000405578 SLC7A14Q8TBB6 771 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 FGF14Q92915 247 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 KAT5Q92993 513 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 MYLPFQ96A32 169 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 PCED1BQ96HM7 432 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 KREMEN1Q96MU8 473 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 TMEM209Q96SK2 561 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 SEPT5Q99719 369 aaPredicted RBP11.18□□□□□ -0.62
RPAIN-204ENST00000405578 XPO4Q9C0E2 1151 aaKnown RBP11.18□□□□□ -0.62
RPAIN-204ENST00000405578 SIX2Q9NPC8 291 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 ZDHHC7Q9NXF8 308 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 HESX1Q9UBX0 185 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 ANGPTL2Q9UKU9 493 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 SIK3Q9Y2K2 1263 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 NOTCH4Q99466 2003 aa11.18□□□□□ -0.62
RPAIN-204ENST00000405578 MED7O43513 233 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 ATP2C2O75185 946 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 ZMYND10O75800 440 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 VDRP11473 427 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 ACO1P21399 889 aaKnown RBP11.17□□□□□ -0.62
RPAIN-204ENST00000405578 CD72P21854 359 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 ANXA13P27216 316 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 HOXA9P31269 272 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 STAT1P42224 750 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 MAGEA9P43362 315 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 RAD23BP54727 409 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 PTK2Q05397 1052 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 DRAP1Q14919 205 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-204ENST00000405578 TAF12Q16514 161 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 SLC44A4Q53GD3 710 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 GJB7Q6PEY0 223 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 SARM1Q6SZW1 724 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 PARM1Q6UWI2 310 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 ITIH5Q86UX2 942 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 LRRTM3Q86VH5 581 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 GAS2L3Q86XJ1 694 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 SHC3Q92529 594 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 CYFIP2Q96F07 1278 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 OSBPL6Q9BZF3 934 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 EDEM3Q9BZQ6 932 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 DPEP3Q9H4B8 488 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 CRTAC1Q9NQ79 661 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 PRMT8Q9NR22 394 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-204ENST00000405578 EHD2Q9NZN4 543 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 CEP72Q9P209 647 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 HMGXB4Q9UGU5 601 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 RAB23Q9ULC3 237 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.17□□□□□ -0.621e-9■□□□□ 9.3
RPAIN-204ENST00000405578 FHOD1Q9Y613 1164 aa11.17□□□□□ -0.62
RPAIN-204ENST00000405578 PDCD11Q14690 1871 aaKnown RBP11.17□□□□□ -0.62
RPAIN-204ENST00000405578 SPAG17Q6Q759 2223 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 TICRRQ7Z2Z1 1910 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 TRIM66O15016 1216 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 HCRTO43612 131 aa11.16□□□□□ -0.62
RPAIN-204ENST00000405578 FAM200BP0CF97 657 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms