RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 TXNDC9O14530 226 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 POLR2BP30876 1174 aaKnown RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 OTUD4Q01804 1114 aaKnown RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 GHRHRQ02643 423 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 HADHQ16836 314 aaKnown RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 TFDP3Q5H9I0 405 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 RHBDF2Q6PJF5 856 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 IZUMO2Q6UXV1 221 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 CFAP61Q8NHU2 1237 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 JOSD2Q8TAC2 188 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 FAM136AQ96C01 138 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 ELP3Q9H9T3 547 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 RNF19AQ9NV58 838 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 ETNK2Q9NVF9 386 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 LRCH1Q9Y2L9 728 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 KAT6AQ92794 2004 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 OGTO15294 1046 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 FARP2O94887 1054 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 ASS1P00966 412 aaKnown RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 KITP10721 976 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 PTPN4P29074 926 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 KLF1Q13351 362 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 PARP6Q2NL67 630 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 EEF1DP3Q658K8 133 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 OLFML2BQ68BL8 750 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 IRGCQ6NXR0 463 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 FAM81AQ8TBF8 368 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 SNRNP27Q8WVK2 155 aaKnown RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 PHF12Q96QT6 1004 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 TMEM109Q9BVC6 243 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 RPF1Q9H9Y2 349 aaKnown RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 GINM1Q9NU53 330 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 IKBKGQ9Y6K9 419 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 MAP3K7O43318 606 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 DCTN3O75935 186 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 OR6B1O95007 311 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 KRT4P19013 534 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 KDSRQ06136 332 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 GJC2Q5T442 439 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 CLNKQ7Z7G1 428 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 BRSK2Q8IWQ3 736 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 FBXO16Q8IX29 292 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 CCDC33Q8N5R6 958 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 FAM71DQ8N9W8 422 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 C10orf82Q8WW14 230 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 ABTB1Q969K4 478 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 MARCOQ9UEW3 520 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 CNTNAP2Q9UHC6 1331 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 WFS1O76024 890 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 ASMTLO95671 621 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 CD48P09326 243 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 ABCD1P33897 745 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 OAZ1P54368 228 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 YARSP54577 528 aaKnown RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 ATF7IP2Q5U623 682 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 EFCAB12Q6NXP0 572 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 POTEAQ6S8J7 498 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 C3orf62Q6ZUJ4 267 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 TMEM174Q8WUU8 243 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 ITFG2Q969R8 447 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 VCPIP1Q96JH7 1222 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 PCYT2Q99447 389 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 SHCBP1LQ9BZQ2 653 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 AKT3Q9Y243 479 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 DNALI1O14645 258 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 HNRNPRO43390 633 aaKnown RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 PSMG1O95456 288 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 ITGB3P05106 788 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 EFNA5P52803 228 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 MOGSQ13724 837 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 LBRQ14739 615 aaKnown RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 HIF1AQ16665 826 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 CNPY1Q3B7I2 92 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 APOBEC3FQ8IUX4 373 aaKnown RBP15.69■□□□□ 0.1
ATG4B-206ENST00000405546 CTAGE3PQ8IX95 158 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 EFCAB3Q8N7B9 438 aa15.69■□□□□ 0.1
ATG4B-206ENST00000405546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■■□□□ 13
ATG4B-206ENST00000405546 H7C0C1 242 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 M0QYV0 167 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 HAUS5O94927 633 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 ENO1P06733 434 aaKnown RBP15.68■□□□□ 0.1
ATG4B-206ENST00000405546 ATP5OP48047 213 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 RGS7P49802 495 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 VGLL4Q14135 290 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 PIGHQ14442 188 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-206ENST00000405546 TAF5Q15542 800 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 FAM102AQ5T9C2 384 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-206ENST00000405546 OR6B2Q6IFH4 312 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 C1orf228Q6PIY5 440 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 MOB2Q70IA6 237 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 PPP1R13LQ8WUF5 828 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 CLIC5Q9NZA1 410 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 HEY1Q9Y5J3 304 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 H3BRJ5 948 aa15.68■□□□□ 0.1
ATG4B-206ENST00000405546 EDF1O60869 148 aaKnown RBP15.68■□□□□ 0.1
ATG4B-206ENST00000405546 ESRRAP11474 423 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-206ENST00000405546 YWHAGP61981 247 aaKnown RBP eCLIP15.68■□□□□ 0.1
ATG4B-206ENST00000405546 TFDP1Q14186 410 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms