RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 AKR1B10O60218 316 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 GABBR2O75899 941 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 PTMAP06454 111 aaKnown RBP35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 HOXA9P31269 272 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 GFPT1Q06210 699 aaPredicted RBP35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 TMTC1Q8IUR5 882 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 LRRC8AQ8IWT6 810 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 KCTD13Q8WZ19 329 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 PPP1R13BQ96KQ4 1090 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 SLC4A5Q9BY07 1137 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 SFXN1Q9H9B4 322 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 TJP2Q9UDY2 1190 aa35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 ZNF638Q14966 1978 aaKnown RBP35.09■■■■□ 3.21
CSNK1E-204ENST00000403904 SOWAHDA6NJG2 315 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 HNRNPA1P09651 372 aaKnown RBP eCLIP35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 USP46P62068 366 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 CENPCQ03188 943 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 DLX2Q07687 328 aaPredicted RBP35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 PTPN20Q4JDL3 420 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 RAB41Q5JT25 222 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 ANKRD54Q6NXT1 300 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 TMC5Q6UXY8 1006 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 CEP295NLQ96MC4 621 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 LRRC4Q9HBW1 653 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 CLEC1BQ9P126 229 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 MAGED2Q9UNF1 606 aaPredicted RBP35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 SPTBN5Q9NRC6 3674 aaKnown RBP35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 LCP1P13796 627 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 KIF11P52732 1056 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 DNAJB7Q7Z6W7 309 aaPredicted RBP35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 DNAAF5Q86Y56 855 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 PPM1EQ8WY54 764 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 PSMG2Q969U7 264 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 PABPC5Q96DU9 382 aaKnown RBP35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 ZNF512Q96ME7 567 aaPredicted RBP35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 PPP1R9BQ96SB3 815 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 PRKD2Q9BZL6 878 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 SPTLC3Q9NUV7 552 aa35.08■■■■□ 3.21
CSNK1E-204ENST00000403904 DOCK6Q96HP0 2047 aa35.07■■■■□ 3.21
CSNK1E-204ENST00000403904 E5RJQ4 531 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 TBX10O75333 385 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 CSH1P0DML2 217 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 CSH2P0DML3 217 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 NSFP46459 744 aaKnown RBP35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 RPL34P49207 117 aaKnown RBP35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 TKTL1P51854 596 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 ADIGQ0VDE8 80 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 COL19A1Q14993 1142 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 TAF12Q16514 161 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 SLC18A3Q16572 532 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 C2CD6Q53TS8 623 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 ACAD10Q6JQN1 1059 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 ERICH1Q86X53 443 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 ELMOD1Q8N336 334 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 ZNF707Q96C28 371 aaPredicted RBP35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 APOL5Q9BWW9 433 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 ASB3Q9Y575 518 aa35.07■■■■□ 3.2
CSNK1E-204ENST00000403904 HMGA1P17096 107 aaKnown RBP35.06■■■■□ 3.2
CSNK1E-204ENST00000403904 LTBRP36941 435 aa35.06■■■■□ 3.2
CSNK1E-204ENST00000403904 RARS2Q5T160 578 aaKnown RBP35.06■■■■□ 3.2
CSNK1E-204ENST00000403904 SYCE2Q6PIF2 218 aa35.06■■■■□ 3.2
CSNK1E-204ENST00000403904 TMEM110Q86TL2 294 aa35.06■■■■□ 3.2
CSNK1E-204ENST00000403904 ITIH5Q86UX2 942 aa35.06■■■■□ 3.2
CSNK1E-204ENST00000403904 NAGPAQ9UK23 515 aa35.06■■■■□ 3.2
CSNK1E-204ENST00000403904 GZMAP12544 262 aa35.05■■■■□ 3.2
CSNK1E-204ENST00000403904 MTF1Q14872 753 aa35.05■■■■□ 3.2
CSNK1E-204ENST00000403904 SYNCQ9H7C4 482 aa35.05■■■■□ 3.2
CSNK1E-204ENST00000403904 HCFC1R1Q9NWW0 138 aa35.05■■■■□ 3.2
CSNK1E-204ENST00000403904 XYLBO75191 536 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 RTN3O95197 1032 aaPredicted RBP35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 ERBB2P04626 1255 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 MMP8P22894 467 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 ACADSBP45954 432 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 ALKBH5Q6P6C2 394 aaKnown RBP35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 MMS22LQ6ZRQ5 1243 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 SCUBE3Q8IX30 993 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 CCDC170Q8IYT3 715 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 SIX6OS1Q8N1H7 587 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 MIS12Q9H081 205 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 CYLDQ9NQC7 956 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 USP3Q9Y6I4 520 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 BRWD1Q9NSI6 2320 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 CCDC122Q5T0U0 273 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 CYP4A22Q5TCH4 519 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 RAD9BQ6WBX8 426 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 CMASQ8NFW8 434 aaPredicted RBP35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 CORO1BQ9BR76 489 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 C11orf70Q9BRQ4 267 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 ULBP1Q9BZM6 244 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 IL37Q9NZH6 218 aa35.04■■■■□ 3.2
CSNK1E-204ENST00000403904 RTN2O75298 545 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 FTLP02792 175 aaPredicted RBP35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 USP17L7P0C7H9 530 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 HOXB8P17481 243 aaPredicted RBP35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 YWHAQP27348 245 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 PHF13Q86YI8 300 aaPredicted RBP35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 HS6ST3Q8IZP7 471 aa35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 IPO4Q8TEX9 1081 aaKnown RBP35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 SMG7Q92540 1137 aaKnown RBP35.03■■■■□ 3.2
CSNK1E-204ENST00000403904 NDRG1Q92597 394 aaKnown RBP35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms