RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	JAML	Q86YT9	394 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	KIAA2013	Q8IYS2	634 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	HACE1	Q8IYU2	909 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CNNM3	Q8NE01	707 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CRYGN	Q8WXF5	182 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SMG7	Q92540	1137 aa	Known RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RUBCN	Q92622	972 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LPP	Q93052	612 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SECISBP2L	Q93073	1101 aa	Known RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CCDC136	Q96JN2	1154 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	IPO9	Q96P70	1041 aa	Known RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CDC6	Q99741	560 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FDXACB1	Q9BRP7	624 aa	Predicted RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	C22orf23	Q9BZE7	217 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TBC1D17	Q9HA65	648 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RSAD1	Q9HA92	442 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	WDR6	Q9NNW5	1121 aa	Known RBP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	UBN1	Q9NPG3	1134 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	MAN1C1	Q9NR34	630 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	EPS15L1	Q9UBC2	864 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CA14	Q9ULX7	337 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SIT1	Q9Y3P8	196 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PCDHB2	Q9Y5E7	798 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CLUH	O75153	1309 aa		7.5	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CCDC195	A0A1B0GUA6	201 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	INPPL1	O15357	1258 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	MSH4	O15457	936 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	DKC1	O60832	514 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	KIN	O60870	393 aa	Known RBP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CSDE1	O75534	798 aa	Known RBP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ERLIN2	O94905	339 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SOD2	P04179	222 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	L1CAM	P32004	1257 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TRHR	P34981	398 aa	Predicted RBP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	GLUD2	P49448	558 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CREM	Q03060	361 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NCBP1	Q09161	790 aa	Known RBP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NECTIN1	Q15223	517 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TESK1	Q15569	626 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	HSF5	Q4G112	596 aa	Predicted RBP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FOXB2	Q5VYV0	432 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZSWIM2	Q8NEG5	633 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ABHD4	Q8TB40	342 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	HDAC7	Q8WUI4	952 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RMDN1	Q96DB5	314 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	BORCS6	Q96GS4	357 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	KIRREL1	Q96J84	757 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TCEANC2	Q96MN5	208 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	JMJD8	Q96S16	334 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RPS6KC1	Q96S38	1066 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	HERC2P3	Q9BVR0	1158 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RHOBTB2	Q9BYZ6	727 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ARHGEF3	Q9NR81	526 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	AGPAT5	Q9NUQ2	364 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZDHHC7	Q9NXF8	308 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	DNAJB4	Q9UDY4	337 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	USP34	Q70CQ2	3546 aa		7.49	□□□□□ -1.21
CEACAM1-208	ENST00000403461	MYH7B	A7E2Y1	1941 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TRBV23-1	A0A0A0MS06	115 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TEX28	O15482	410 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	MEFV	O15553	781 aa	Predicted RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PRPF3	O43395	683 aa	Known RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NARS	O43776	548 aa	Known RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PSPN	O60542	156 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	MAF	O75444	373 aa	Predicted RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	C1R	P00736	705 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	POMC	P01189	267 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	JUNB	P17275	347 aa	Predicted RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	OR1G1	P47890	313 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PSMC5	P62195	406 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	EXOSC10	Q01780	885 aa	Known RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LAPTM5	Q13571	262 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PCBP1	Q15365	356 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TARBP2	Q15633	366 aa	Known RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	UGCG	Q16739	394 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FAM209A	Q5JX71	171 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	FYB2	Q5VWT5	728 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	DENND5A	Q6IQ26	1287 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	DCLRE1A	Q6PJP8	1040 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	GET4	Q7L5D6	327 aa	Predicted RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SRGAP1	Q7Z6B7	1085 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	ZNF280B	Q86YH2	543 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CPNE8	Q86YQ8	564 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	C1orf210	Q8IVY1	113 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SLC44A3	Q8N4M1	653 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TCP11	Q8WWU5	503 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PSPC1	Q8WXF1	523 aa	Known RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	RIN2	Q8WYP3	895 aa	Predicted RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	SLC5A5	Q92911	643 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	LENG9	Q96B70	501 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	CCDC51	Q96ER9	411 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	DHRS4	Q9BTZ2	278 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	TRIM6	Q9C030	488 aa	Predicted RBP	7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	UNC45A	Q9H3U1	944 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PLEKHA4	Q9H4M7	779 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	NCDN	Q9UBB6	729 aa		7.48	□□□□□ -1.21
CEACAM1-208	ENST00000403461	PRG3	Q9Y2Y8	225 aa	Predicted RBP	7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms