RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 ATP11BQ9Y2G3 1177 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 ZNF646O15015 1829 aaPredicted RBP4.12□□□□□ -1.75
CCDC178-204ENST00000403303 TJP1Q07157 1748 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 TADA2AO75478 443 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 CNOT4O95628 575 aaKnown RBP4.12□□□□□ -1.75
CCDC178-204ENST00000403303 MLYCDO95822 493 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 ANXA1P04083 346 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 LYL1P12980 280 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 RAC2P15153 192 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 ECHS1P30084 290 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 ADMP35318 185 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 NOP2P46087 812 aaKnown RBP4.12□□□□□ -1.75
CCDC178-204ENST00000403303 PCBP3P57721 371 aaKnown RBP4.12□□□□□ -1.75
CCDC178-204ENST00000403303 TRIM29Q14134 588 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 HIST2H2BCQ6DN03 193 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 HIST2H2BDQ6DRA6 164 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 CNKSR3Q6P9H4 555 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 AVL9Q8NBF6 648 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 UTP4Q969X6 686 aaKnown RBP4.12□□□□□ -1.75
CCDC178-204ENST00000403303 ZFYVE21Q9BQ24 234 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 SRSF8Q9BRL6 282 aaKnown RBP4.12□□□□□ -1.75
CCDC178-204ENST00000403303 NUF2Q9BZD4 464 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 ZWILCHQ9H900 591 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 TAB2Q9NYJ8 693 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 KDM3BQ7LBC6 1761 aa4.12□□□□□ -1.75
CCDC178-204ENST00000403303 COL3A1P02461 1466 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 A0A087X0M5 115 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 A0A1B0GX30 115 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 hCG_1809904A0A1W2PP81 198 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 A0A1W2PPE2 198 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 A0A1W2PR64 198 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 HMX2A2RU54 273 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 F2RL2O00254 374 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 NRG2O14511 850 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 KIAA0355O15063 1070 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 RGS10O43665 173 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 NPHS1O60500 1241 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 SRGAP2O75044 1071 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 RPP40O75818 363 aaKnown RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 GGPS1O95749 300 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 CXCR5P32302 372 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 DEKP35659 375 aaKnown RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 FAPQ12884 760 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 PLA1AQ53H76 456 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 MICU3Q86XE3 530 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 C3orf20Q8ND61 904 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 GPR150Q8NGU9 434 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 WHAMMQ8TF30 809 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 MFSD14AQ96MC6 490 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 PRDM8Q9NQV8 689 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 ING3Q9NXR8 418 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 FETUBQ9UGM5 382 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 ZNF335Q9H4Z2 1342 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 GOLGA6L3A6NEY3 463 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 MUSKO15146 869 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 CYP17A1P05093 508 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 PFKMP08237 780 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 DNASE1P24855 282 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 ARL3P36405 182 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 HK2P52789 917 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 AP2B1P63010 937 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 GALNTL6Q49A17 601 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 AFMIDQ63HM1 303 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 RAB12Q6IQ22 244 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 TRAT1Q6PIZ9 186 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 BEND5Q7L4P6 421 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 PLPPR4Q7Z2D5 763 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 SAPCD2Q86UD0 394 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 HERC6Q8IVU3 1022 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 SCARF2Q96GP6 870 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 GBP5Q96PP8 586 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 UBL7Q96S82 380 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 EPB41L1Q9H4G0 881 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 RBM12Q9NTZ6 932 aaKnown RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 ABCF3Q9NUQ8 709 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 MYO1AQ9UBC5 1043 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 KCNH3Q9ULD8 1083 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 VPS4AQ9UN37 437 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 KRT87PA6NCN2 255 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 GNAT3A8MTJ3 354 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 TAF4O00268 1085 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 ERBB2P04626 1255 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 ITGB1P05556 798 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 IDEP14735 1019 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 PRKAG1P54619 331 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 LACTBP83111 547 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 HNRNPUQ00839 825 aaKnown RBP eCLIP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 SNX17Q15036 470 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 RPUSD3Q6P087 351 aaKnown RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 FOXR1Q6PIV2 292 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 SUSD1Q6UWL2 747 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 RSPO2Q6UXX9 243 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 RNF169Q8NCN4 708 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 FAM46DQ8NEK8 389 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 OTUD7AQ8TE49 926 aaPredicted RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 AMNQ9BXJ7 453 aa4.11□□□□□ -1.75
CCDC178-204ENST00000403303 MRPL46Q9H2W6 279 aaKnown RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 CPSF3Q9UKF6 684 aaKnown RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 MTO1Q9Y2Z2 717 aaKnown RBP4.11□□□□□ -1.75
CCDC178-204ENST00000403303 NSD2O96028 1365 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms