RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 ANP32DO95626 131 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 CST3P01034 146 aaPredicted RBP19.28■□□□□ 0.68
USP48-204ENST00000400301 APOC2P02655 101 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 DGKDQ16760 1214 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 EEF1DP3Q658K8 133 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 PLEKHA7Q6IQ23 1121 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 FAM131BQ86XD5 332 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 RIOX2Q8IUF8 465 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 CRYGNQ8WXF5 182 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 TUT1Q9H6E5 874 aaKnown RBP19.28■□□□□ 0.68
USP48-204ENST00000400301 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.28■□□□□ 0.684e-7■■■■□ 26.4
USP48-204ENST00000400301 MROH7Q68CQ1 1323 aa19.28■□□□□ 0.68
USP48-204ENST00000400301 DNAJC8O75937 253 aaPredicted RBP19.27■□□□□ 0.68
USP48-204ENST00000400301 ADRA1DP25100 572 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 COG7P83436 770 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 PDK1Q15118 436 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 MON1BQ7L1V2 547 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 OSBPL1AQ9BXW6 950 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 MTFR1LQ9H019 292 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 SLC12A6Q9UHW9 1150 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 UBQLN1Q9UMX0 589 aaKnown RBP19.27■□□□□ 0.68
USP48-204ENST00000400301 hCG_1818297A0A087WSY0 165 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 EEF2KO00418 725 aaKnown RBP19.27■□□□□ 0.68
USP48-204ENST00000400301 DDNO94850 711 aaPredicted RBP19.27■□□□□ 0.68
USP48-204ENST00000400301 BMPR2Q13873 1038 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 C4orf22Q6V702 233 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 MTMR14Q8NCE2 650 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 FSD1LQ9BXM9 530 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 CXorf56Q9H5V9 222 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 ZNF536O15090 1300 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 E5RJQ4 531 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 BANF1O75531 89 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 NFICP08651 508 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 RPA3P35244 121 aaPredicted RBP19.27■□□□□ 0.68
USP48-204ENST00000400301 DCAF4L1Q3SXM0 396 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 DENND5BQ6ZUT9 1274 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 TFB1MQ8WVM0 346 aaKnown RBP19.27■□□□□ 0.68
USP48-204ENST00000400301 HDAC11Q96DB2 347 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 EPAS1Q99814 870 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 Q9H521 79 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 PLEKHA5Q9HAU0 1116 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 GRID1Q9ULK0 1009 aa19.27■□□□□ 0.68
USP48-204ENST00000400301 B4GALT5O43286 388 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 GMNNO75496 209 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 BGNP21810 368 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 ARPP19P56211 112 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 DBN1Q16643 649 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 SLC7A14Q8TBB6 771 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 DDX27Q96GQ7 796 aaKnown RBP19.27■□□□□ 0.67
USP48-204ENST00000400301 CDT1Q9H211 546 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 L3MBTL1Q9Y468 752 aa19.27■□□□□ 0.67
USP48-204ENST00000400301 LRP5O75197 1615 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 FOXO6A8MYZ6 492 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 MOCS2O96007 188 aaPredicted RBP19.26■□□□□ 0.67
USP48-204ENST00000400301 CYP2C8P10632 490 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 MTFR1Q15390 333 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 SCUBE3Q8IX30 993 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 AP4E1Q9UPM8 1137 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 ADM5C9JUS6 153 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 PEX10O60683 326 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 RPL22P35268 128 aaKnown RBP19.26■□□□□ 0.67
USP48-204ENST00000400301 TAF6P49848 677 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 MFSD5Q6N075 450 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 THTPAQ9BU02 230 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 AHDC1Q5TGY3 1603 aaPredicted RBP19.26■□□□□ 0.67
USP48-204ENST00000400301 TM9SF1O15321 606 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 ELF3P78545 371 aaPredicted RBP19.26■□□□□ 0.67
USP48-204ENST00000400301 C15orf59Q2T9L4 293 aaPredicted RBP19.26■□□□□ 0.67
USP48-204ENST00000400301 ZNF75CPQ92670 426 aaPredicted RBP19.26■□□□□ 0.67
USP48-204ENST00000400301 SERPINI1Q99574 410 aa19.26■□□□□ 0.67
USP48-204ENST00000400301 ADARB2Q9NS39 739 aaKnown RBP19.26■□□□□ 0.67
USP48-204ENST00000400301 HMGCRP04035 888 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 MYL2P10916 166 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 DPYSL3Q14195 570 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 CCDC117Q8IWD4 279 aaPredicted RBP19.25■□□□□ 0.67
USP48-204ENST00000400301 RYBPQ8N488 228 aaPredicted RBP19.25■□□□□ 0.67
USP48-204ENST00000400301 C2orf69Q8N8R5 385 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 VPS39Q96JC1 886 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 DHX33Q9H6R0 707 aaKnown RBP19.25■□□□□ 0.67
USP48-204ENST00000400301 APOBEC3GQ9HC16 384 aaKnown RBP19.25■□□□□ 0.67
USP48-204ENST00000400301 NDE1Q9NXR1 346 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 ITGA11Q9UKX5 1188 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 ACTL7BQ9Y614 415 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 CCL15-CCL14A0A0B4J2E2 113 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 RRN3P2A6NIE6 340 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 AP2B1P63010 937 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 CCL15Q16663 113 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 SV2CQ496J9 727 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 C12orf50Q8NA57 414 aaPredicted RBP19.25■□□□□ 0.67
USP48-204ENST00000400301 ZNF669Q96BR6 464 aaPredicted RBP19.25■□□□□ 0.67
USP48-204ENST00000400301 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 WNK4Q96J92 1243 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 GOLGA8QA0A0J9YX86 632 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 ARHGEF37A1IGU5 675 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 GOLGA8OA6NCC3 632 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 GOLGA8NF8WBI6 632 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 PMM2O15305 246 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 FARP2O94887 1054 aaPredicted RBP19.25■□□□□ 0.67
USP48-204ENST00000400301 ABHD2P08910 425 aa19.25■□□□□ 0.67
USP48-204ENST00000400301 SNTG2Q9NY99 539 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms