RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NAALADL1Q9UQQ1 740 aa18.54■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ZFXP17010 805 aaPredicted RBP18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 BCAT1P54687 386 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 EIF3EP60228 445 aaKnown RBP18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 C1QTNF8P60827 252 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ITIH4Q14624 930 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SNX17Q15036 470 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 NOMO1Q15155 1222 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SV2CQ496J9 727 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TAF2Q6P1X5 1199 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 OLFML1Q6UWY5 402 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SOCS4Q8WXH5 440 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SGSM3Q96HU1 749 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 TNIP3Q96KP6 325 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 FAM118BQ9BPY3 351 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PLCD4Q9BRC7 762 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PCSK1NQ9UHG2 260 aa18.53■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KPNA7A9QM74 516 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 E7ESA3 106 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RECQL4O94761 1208 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CPP00450 1065 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 IFNB1P01574 187 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ATP2A2P16615 1042 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 HOXC8P31273 242 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RGS2P41220 211 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 BST2Q10589 180 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ORC1Q13415 861 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SMTNL2Q2TAL5 461 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 KCNT1Q5JUK3 1230 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PPP1R26Q5T8A7 1209 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SLC26A9Q7LBE3 791 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 PIGWQ7Z7B1 504 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 NAT8LQ8N9F0 302 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 HAUS1Q96CS2 278 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 RNF157Q96PX1 679 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 OSMRQ99650 979 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 MRPL45Q9BRJ2 306 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 CALN1Q9BXU9 219 aa18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 ACTR5Q9H9F9 607 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB1-204ENST00000399084 SMIM28A0A1B0GU29 152 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GOLGA6L7A0A1B0GV03 622 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 EXOC1LA0A1B0GW35 172 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 A8MXQ7 604 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ADCY6O43306 1168 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ZNF189O75820 626 aaPredicted RBP18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RBP3P10745 1247 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CTCFP49711 727 aaPredicted RBP18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TAF6P49848 677 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CDH6P55285 790 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SOWAHAQ2M3V2 549 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PMF1Q6P1K2 205 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ACOT1Q86TX2 421 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CNPY4Q8N129 248 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PDIK1LQ8N165 341 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ATP11CQ8NB49 1132 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GLIS1Q8NBF1 620 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 OR6B3Q8NGW1 331 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SPATA18Q8TC71 538 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 MAML1Q92585 1016 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 HSPH1Q92598 858 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RTP4Q96DX8 246 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C9orf72Q96LT7 481 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ZNF670Q9BS34 389 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 EIF2AQ9BY44 585 aaKnown RBP18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RABEP2Q9H5N1 569 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 NKIRAS1Q9NYS0 192 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SAMD15Q9P1V8 674 aa18.52■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TMEM120BA0PK00 339 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SPAG6O75602 509 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 BRAFP15056 766 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 RPL22P35268 128 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 GNL1P36915 607 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SLC8A3P57103 927 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ROR1Q01973 937 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CCDC14Q49A88 953 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CCDC121Q6ZUS5 278 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TTC30AQ86WT1 665 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 PSTKQ8IV42 348 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 TOP6BLQ8N6T0 577 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CCDC197Q8NCU1 140 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CENPIQ92674 756 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ACSF2Q96CM8 615 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SNX25Q9H3E2 840 aa18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 SSU72Q9NP77 194 aaKnown RBP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ZMYND8Q9ULU4 1186 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C17orf102A2RUQ5 167 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 FSBPO95073 299 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 IGHA2P01877 340 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 ZSCAN5DPP0CG00 497 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 NR2C2P49116 596 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 XRCC4Q13426 336 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 DPYSL3Q14195 570 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 KRT81Q14533 505 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 EFHC1Q5JVL4 640 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 UBAP2Q5T6F2 1119 aaKnown RBP18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 CYP4V2Q6ZWL3 525 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C10orf67Q8IYJ2 551 aa18.5■□□□□ 0.55
HLA-DQB1-204ENST00000399084 C12orf29Q8N999 325 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms