RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CSH2P0DML3 217 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PTPN2P17706 415 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PLA2G4AP47712 749 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PGFP49763 221 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PDE6CP51160 858 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 KCNQ1P51787 676 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 BPIFB4P59827 614 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ARID5AQ03989 594 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 VEPH1Q14D04 833 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 RAB41Q5JT25 222 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 HGSNATQ68CP4 663 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 DENND5BQ6ZUT9 1274 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ITFG1Q8TB96 612 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SHKBP1Q8TBC3 707 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TRMT2BQ96GJ1 504 aaKnown RBP13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ZNF512Q96ME7 567 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 UBXN6Q9BZV1 441 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 DNAI2Q9GZS0 605 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 AVENQ9NQS1 362 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 HESX1Q9UBX0 185 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TJP2Q9UDY2 1190 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CLUHO75153 1309 aa13.11□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MED7O43513 233 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MFAP3LO75121 409 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ADCY5O95622 1261 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 IL9P15248 144 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 FERP16591 822 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GJA1P17302 382 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CEBPBP17676 345 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ANXA13P27216 316 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 HNRNPH3P31942 346 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CDH5P33151 784 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 KRT9P35527 623 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PRKCIP41743 596 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MTHFRP42898 656 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 RPL34P49207 117 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 RGS7P49802 495 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 KIF11P52732 1056 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CDR2Q01850 454 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 TRIM14Q14142 442 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SMAD2Q15796 467 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ASIC2Q16515 512 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PABPC1LQ4VXU2 614 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PTCRAQ6ISU1 281 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CES5AQ6NT32 575 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 WDR59Q6PJI9 974 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ITIH5Q86UX2 942 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 NUP93Q8N1F7 819 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 C1orf131Q8NDD1 294 aaKnown RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 IQCDQ96DY2 449 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 GRPEL1Q9HAV7 217 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PIDD1Q9HB75 910 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ASAH2Q9NR71 780 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MAGED2Q9UNF1 606 aaPredicted RBP13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 USP3Q9Y6I4 520 aa13.1□□□□□ -0.31
HLA-DQB1-203ENST00000399082 FAM170AA1A519 330 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CYP1A1P04798 512 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PLEKP08567 350 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SKILP12757 684 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 MYL4P12829 197 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 NOMO3P69849 1222 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CYP4F8P98187 520 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PDCLQ13371 301 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 PTPN20Q4JDL3 420 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ATAT1Q5SQI0 421 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 STXBP5Q5T5C0 1151 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ZNF571Q7Z3V5 609 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ZNF677Q86XU0 584 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 KCTD13Q8WZ19 329 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SYN2Q92777 582 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 RIPOR3Q96MK2 946 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 CPXM1Q96SM3 734 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 DNAJC7Q99615 494 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 SLC4A5Q9BY07 1137 aa13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 LUC7L2Q9Y383 392 aaKnown RBP13.09□□□□□ -0.31
HLA-DQB1-203ENST00000399082 UNC80Q8N2C7 3258 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 A0A1W2PRU2 124 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GOLGA6L3A6NEY3 463 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PIK3R2O00459 728 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 RTN3O95197 1032 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ZDHHC11BP0C7U3 371 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 UNGP13051 313 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 FSHRP23945 695 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 YWHAQP27348 245 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 GABRR2P28476 465 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 CDC25BP30305 580 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ADKP55263 362 aaKnown RBP13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 ADIGQ0VDE8 80 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 IFRD2Q12894 506 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TAF10Q12962 218 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 TEAD2Q15562 447 aa13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 PDZD4Q76G19 769 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQB1-203ENST00000399082 SCD5Q86SK9 330 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms