RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 NR2C2P49116 596 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 MDH1BQ5I0G3 518 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 CYB5D1Q6P9G0 228 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SPOCD1Q6ZMY3 1216 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 GPR63Q9BZJ6 419 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 THAP2Q9H0W7 228 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 SCUBE2Q9NQ36 999 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 KBTBD4Q9NVX7 518 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 WWOXQ9NZC7 414 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
SPTLC3-201ENST00000399002 TRIM49D1C9J1S8 452 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 POLRMTO00411 1230 aaKnown RBP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 PROSCO94903 275 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SUPT20HL2P0C7V6 817 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 PTPN4P29074 926 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ALDH1A3P47895 512 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 HK2P52789 917 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 TRIP4Q15650 581 aaPredicted RBP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 DCAF6Q58WW2 860 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC26A11Q86WA9 606 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 IPMKQ8NFU5 416 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 MAGED4Q96JG8 741 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 C9orf72Q96LT7 481 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 TBCBQ99426 244 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 DCLRE1BQ9H816 532 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ELP3Q9H9T3 547 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 PCDH9Q9HC56 1237 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ALG13Q9NP73 1137 aaKnown RBP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 RNF181Q9P0P0 153 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SHOC2Q9UQ13 582 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 TECPR2O15040 1411 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 FAM196BA6NMK8 535 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 PIK3CDO00329 1044 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 GUCA1CO95843 209 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 PRKCQQ04759 706 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 TRMT5Q32P41 509 aaKnown RBP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 NT5DC1Q5TFE4 455 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 CDKAL1Q5VV42 579 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SCARA3Q6AZY7 606 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 C4orf19Q8IY42 314 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 MYO1HQ8N1T3 1032 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ZNF669Q96BR6 464 aaPredicted RBP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ZFRQ96KR1 1074 aaKnown RBP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ECSITQ9BQ95 431 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 WDCPQ9H6R7 721 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 F5H5T6 163 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ERVK-24P63145 666 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SYCP2LQ5T4T6 812 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 FBXO36Q8NEA4 188 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 DNERQ8NFT8 737 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 CASP10Q92851 521 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SLC24A3Q9HC58 644 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 TRIM10Q9UDY6 481 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 SPATA31D1Q6ZQQ2 1576 aa8.65□□□□□ -1.02
SPTLC3-201ENST00000399002 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 PSMC3P17980 439 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 TGM3Q08188 693 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF177Q13360 481 aaPredicted RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ZC2HC1CQ53FD0 456 aaPredicted RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ZRANB3Q5FWF4 1079 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 SEL1L3Q68CR1 1132 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF544Q6NX49 715 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ARMC6Q6NXE6 501 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 SLFN11Q7Z7L1 901 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 LRRC34Q8IZ02 419 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP4Z2PQ8N1L4 340 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 DDHD1Q8NEL9 900 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 UBXN6Q9BZV1 441 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 MROH8Q9H579 483 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ZCCHC17Q9NP64 241 aaKnown RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 PDGFCQ9NRA1 345 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 CRLS1Q9UJA2 301 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 VWDEQ8N2E2 1590 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 KLHL41O60662 606 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ASMTLO95671 621 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP11B1P15538 503 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 VCAM1P19320 739 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 NUDT2P50583 147 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 RAB27AP51159 221 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 GTF2A2P52657 109 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 FKBP1AP62942 108 aaKnown RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP24A1Q07973 514 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 POLD3Q15054 466 aaPredicted RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 C6orf10Q5SRN2 563 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ZFP1Q6P2D0 407 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 CDR2LQ86X02 465 aaPredicted RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 RAET1EQ8TD07 263 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 MAGEB10Q96LZ2 347 aaPredicted RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 PRKD2Q9BZL6 878 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 RAD21L1Q9H4I0 556 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 CXorf56Q9H5V9 222 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC39A10Q9ULF5 831 aa8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 ATF5Q9Y2D1 282 aaPredicted RBP8.65□□□□□ -1.03
SPTLC3-201ENST00000399002 A0A087X1B8 175 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 FAM205CA6NFA0 338 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 NCAM1P13591 858 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 ALADP13716 330 aa8.64□□□□□ -1.03
SPTLC3-201ENST00000399002 PGAM1P18669 254 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms