RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 RBM12Q9NTZ6 932 aaKnown RBP9.68□□□□□ -0.86
ATL3-201ENST00000398868 LGR5O75473 907 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 C16orf46Q6P387 395 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 XPO6Q96QU8 1125 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 SPRTNQ9H040 489 aaPredicted RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 PAPOLBQ9NRJ5 636 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 TCF3P15923 654 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 TNNI3P19429 210 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 NUDT2P50583 147 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 ATP12AP54707 1039 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 CDKL3Q8IVW4 592 aaPredicted RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 AGGF1Q8N302 714 aaeCLIP9.67□□□□□ -0.86
ATL3-201ENST00000398868 NETO2Q8NC67 525 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 CAPSLQ8WWF8 208 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 COLEC11Q9BWP8 271 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 CCDC134Q9H6E4 229 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 GOLGA8TH3BQL2 631 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 MRPS35P82673 323 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 CNTN2Q02246 1040 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 STX3Q13277 289 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 BFSP2Q13515 415 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 CLEC16AQ2KHT3 1053 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 FNDC3BQ53EP0 1204 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 GRIN3AQ8TCU5 1115 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 CENPTQ96BT3 561 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 MED15Q96RN5 788 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 MTA3Q9BTC8 594 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 PAIP1Q9H074 479 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 CPSF1Q10570 1443 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 UBXN8O00124 270 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 ATP9AO75110 1047 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 GSSP48637 474 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 C3orf67Q6ZVT6 689 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 OTOAQ7RTW8 1153 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 ADGRF2Q8IZF7 708 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 ANKRD49Q8WVL7 239 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 ZNF556Q9HAH1 456 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 XPNPEP3Q9NQH7 507 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 MAGEA13PA6NCF6 341 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 STAU1O95793 577 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 ALDH2P05091 517 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 CXCL8P10145 99 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 USP11P51784 963 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 SNX17Q15036 470 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 CHI3L2Q15782 390 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 UNC45BQ8IWX7 931 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 EMC1Q8N766 993 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 MRPS31Q92665 395 aaKnown RBP9.67□□□□□ -0.86
ATL3-201ENST00000398868 COPS5Q92905 334 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 SYNMO15061 1565 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 PFASO15067 1338 aa9.67□□□□□ -0.86
ATL3-201ENST00000398868 LRRIQ3A6PVS8 624 aaPredicted RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 RAD51CO43502 376 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 DGAT1O75907 488 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 USP1O94782 785 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 CPSF4O95639 269 aaKnown RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 SCNN1BP51168 640 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 CXCL9Q07325 125 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 CUL4AQ13619 759 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 ACAP1Q15027 740 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 SDHAF4Q5VUM1 108 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 E4F1Q66K89 784 aaPredicted RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 KCNV1Q6PIU1 500 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 CXCL17Q6UXB2 119 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 C16orf86Q6ZW13 317 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 GRAMD1AQ96CP6 724 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 NT5MQ9NPB1 228 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 MRPL39Q9NYK5 338 aaKnown RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 PLA2G4CQ9UP65 541 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 IPPQ9Y573 584 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 EFCAB14O75071 495 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 SGPL1O95470 568 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 NTSR2O95665 410 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 NUDT14O95848 222 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 CD4P01730 458 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 FMO5P49326 533 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 PSMC6P62333 389 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 STK4Q13043 487 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 TMEM132BQ14DG7 1078 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 OASLQ15646 514 aaKnown RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 TRMT11Q7Z4G4 463 aaKnown RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 ARHGAP22Q7Z5H3 698 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 LPPQ93052 612 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 APEX2Q9UBZ4 518 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 RRN3P2A6NIE6 340 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 F5H5T6 163 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 GPR182O15218 404 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 TPH1P17752 444 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 POLD3Q15054 466 aaPredicted RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 SGSM1Q2NKQ1 1148 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 INTS5Q6P9B9 1019 aaKnown RBP9.66□□□□□ -0.86
ATL3-201ENST00000398868 FAM131BQ86XD5 332 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 HOMEZQ8IX15 550 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 ATG4AQ8WYN0 398 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 LPAR1Q92633 364 aa9.66□□□□□ -0.86
ATL3-201ENST00000398868 MIEF2Q96C03 454 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms