RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CHORDC1Q9UHD1 332 aaPredicted RBP16.68■□□□□ 0.26
MBD1-207ENST00000398488 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.68■□□□□ 0.26
MBD1-207ENST00000398488 DENND4CQ5VZ89 1909 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 MYH10P35580 1976 aa16.68■□□□□ 0.26
MBD1-207ENST00000398488 NCOR1O75376 2440 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 C2orf78A6NCI8 922 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 CAVIN2O95810 425 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 TPM2P07951 284 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 VIPR2P41587 438 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 POLR2FP61218 127 aaKnown RBP16.67■□□□□ 0.26
MBD1-207ENST00000398488 DENND1BQ6P3S1 775 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 PIGZQ86VD9 579 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 CYP2S1Q96SQ9 504 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 NLRC4Q9NPP4 1024 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 KIAA1257Q9ULG3 409 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 NUMBLQ9Y6R0 609 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 ANAPC1Q9H1A4 1944 aa16.67■□□□□ 0.26
MBD1-207ENST00000398488 TRIOO75962 3097 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 PRAMEF12O95522 483 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 YWHAQP27348 245 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 CDC25CP30307 473 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 JAM2P57087 298 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 SLC47A2Q86VL8 602 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 GAS2L3Q86XJ1 694 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 PLCD3Q8N3E9 789 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 RIN3Q8TB24 985 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 ZSCAN18Q8TBC5 510 aaPredicted RBP16.66■□□□□ 0.26
MBD1-207ENST00000398488 ZNF606Q8WXB4 792 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 NDRG1Q92597 394 aaKnown RBP16.66■□□□□ 0.26
MBD1-207ENST00000398488 CEP295NLQ96MC4 621 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 ASB16Q96NS5 453 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 KXD1Q9BQD3 176 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 STK33Q9BYT3 514 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 GMIPQ9P107 970 aa16.66■□□□□ 0.26
MBD1-207ENST00000398488 FAM92AA1XBS5 289 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 ZNF840PA6NDX5 716 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 F8VZ95 297 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 NARSO43776 548 aaKnown RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 SERPINC1P01008 464 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 GNA15P30679 374 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 KIF11P52732 1056 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 PMF1Q6P1K2 205 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 MAB21L3Q8N8X9 362 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 SLC35F5Q8WV83 523 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 SECISBP2LQ93073 1101 aaKnown RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 FAM81BQ96LP2 452 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 PCMTD1Q96MG8 357 aaPredicted RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 TASP1Q9H6P5 420 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 NMUR1Q9HB89 426 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 OSER1Q9NX31 292 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 CYTH4Q9UIA0 394 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 GOLGA6L19H0YKK7 550 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 M0QYV0 167 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 PIK3R2O00459 728 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 AP5Z1O43299 807 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 THAP12O43422 761 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 TRIM21P19474 475 aaKnown RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 RGS7P49802 495 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 ZXDBP98169 803 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 BST2Q10589 180 aaKnown RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 RAB41Q5JT25 222 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 BHLHA9Q7RTU4 235 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 MON1AQ86VX9 555 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 ARID3BQ8IVW6 561 aaPredicted RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 SLC44A3Q8N4M1 653 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 WDTC1Q8N5D0 677 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 SMARCD2Q92925 531 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 FBXO32Q969P5 355 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 RNF38Q9H0F5 515 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 SLITRK6Q9H5Y7 841 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 UXTQ9UBK9 157 aaPredicted RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 CCL26Q9Y258 94 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 USP3Q9Y6I4 520 aa16.65■□□□□ 0.26
MBD1-207ENST00000398488 ZFP37Q9Y6Q3 630 aaPredicted RBP16.65■□□□□ 0.26
MBD1-207ENST00000398488 FAM170AA1A519 330 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 XPO1O14980 1071 aaKnown RBP16.64■□□□□ 0.25
MBD1-207ENST00000398488 RTN3O95197 1032 aaPredicted RBP16.64■□□□□ 0.25
MBD1-207ENST00000398488 FGF19O95750 216 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 ZDHHC11BP0C7U3 371 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 PBX1P40424 430 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 GPD2P43304 727 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 BCAT1P54687 386 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 SCD5Q86SK9 330 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 ARL14EPQ8N8R7 260 aaPredicted RBP16.64■□□□□ 0.25
MBD1-207ENST00000398488 NEK11Q8NG66 645 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 UBXN6Q9BZV1 441 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 DNAI2Q9GZS0 605 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 RBSNQ9H1K0 784 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 EPHX3Q9H6B9 360 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 TRPC7Q9HCX4 862 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 PNPLA8Q9NP80 782 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 IFNKQ9P0W0 207 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 HESX1Q9UBX0 185 aa16.64■□□□□ 0.25
MBD1-207ENST00000398488 TNFRSF10AO00220 468 aa16.63■□□□□ 0.25
MBD1-207ENST00000398488 GFPT2O94808 682 aa16.63■□□□□ 0.25
MBD1-207ENST00000398488 ABL1P00519 1130 aa16.63■□□□□ 0.25
MBD1-207ENST00000398488 USP17L7P0C7H9 530 aa16.63■□□□□ 0.25
MBD1-207ENST00000398488 PLA2G4AP47712 749 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms