RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 RASGEF1CQ8N431 466 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 IPO4Q8TEX9 1081 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 LBHD1Q9BQE6 289 aaPredicted RBP20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 DUSP16Q9BY84 665 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 MRPL47Q9HD33 250 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 PARVAQ9NVD7 372 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 MRPL42Q9Y6G3 142 aaKnown RBP20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 SCINQ9Y6U3 715 aa20.33■□□□□ 0.85
PDLIM2-204ENST00000397760 COL4A6Q14031 1691 aa20.33■□□□□ 0.84
PDLIM2-204ENST00000397760 BHMG1C9JSJ3 638 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 GJB5O95377 273 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 FGFR3P22607 806 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 GABRB2P47870 512 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 SLC8A3P57103 927 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 GUCY2DQ02846 1103 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 DAAM2Q86T65 1068 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 TSEN2Q8NCE0 465 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 STK32AQ8WU08 396 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 HERVK_113Q902F9 699 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 IGSF21Q96ID5 467 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 B3GALT6Q96L58 329 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 ZNF558Q96NG5 402 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 KRT12Q99456 494 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 PKMYT1Q99640 499 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 GOLPH3Q9H4A6 298 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 CCDC85CA6NKD9 419 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 PGRMC1O00264 195 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 KCNK3O14649 394 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 CARSP49589 748 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 MRPL58Q14197 206 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 ZNF268Q14587 947 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 MAPRE1Q15691 268 aaKnown RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 CLUL1Q15846 466 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 CFAP58Q5T655 872 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 DNAJC24Q6P3W2 148 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 TAS1R1Q7RTX1 841 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 FAM35AQ86V20 835 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 LRRTM3Q86VH5 581 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 MYLPFQ96A32 169 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 ZBED2Q9BTP6 218 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 SLC4A5Q9BY07 1137 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 MIS12Q9H081 205 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 TMLHEQ9NVH6 421 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 WDR35Q9P2L0 1181 aa20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 TTC7AQ9ULT0 858 aaPredicted RBP20.32■□□□□ 0.84
PDLIM2-204ENST00000397760 TCRBV5S1A1TA0A578 114 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 FAM200BP0CF97 657 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 NPR3P17342 541 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 LAG3P18627 525 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 XYLT1Q86Y38 959 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 C3orf20Q8ND61 904 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 BTBD6Q96KE9 485 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 FAM107BQ9H098 131 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 KRT82Q9NSB4 513 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 ANAPC7Q9UJX3 599 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 NFU1Q9UMS0 254 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 RRP15Q9Y3B9 282 aaKnown RBP20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 SLC4A7Q9Y6M7 1214 aa20.31■□□□□ 0.84
PDLIM2-204ENST00000397760 E5RJQ4 531 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 GOLGA8SH3BPF8 625 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 PIK3R2O00459 728 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 XPO1O14980 1071 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 GJB6O95452 261 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 HSPA9P38646 679 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 GSCP56915 257 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 SNX16P57768 344 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 HTRA4P83105 476 aaPredicted RBP20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 MESDQ14696 234 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 CTXN3Q4LDR2 81 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 TMEM110Q86TL2 294 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 COLGALT1Q8NBJ5 622 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 FEZF2Q8TBJ5 459 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 ZIM3Q96PE6 472 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 TTPALQ9BTX7 342 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 CAPS2Q9BXY5 557 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 SLITRK6Q9H5Y7 841 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 TMEM110-MUSTN1A8MSY1 372 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 CAPN15O75808 1086 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 AP1G2O75843 785 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 BEST1O76090 585 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 OR4Q2P0C623 313 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 IRAK1P51617 712 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 PPP2R5EQ16537 467 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 ZNF280DQ6N043 979 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 C11orf63Q6NUN7 778 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 LRIG3Q6UXM1 1119 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 CLEC20AQ6ZU45 233 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 PEX26Q7Z412 305 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 DCP1BQ8IZD4 617 aaKnown RBP20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 SLC39A11Q8N1S5 342 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 CASKIN2Q8WXE0 1202 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 HSFY1Q96LI6 401 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 TRIM7Q9C029 511 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 ZCWPW1Q9H0M4 648 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 INSL6Q9Y581 213 aa20.3■□□□□ 0.84
PDLIM2-204ENST00000397760 TSC2P49815 1807 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 CARNS1A5YM72 827 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 MYO1CO00159 1063 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 MYO1FO00160 1098 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 RAD51CO43502 376 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms